RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TSPEARQ8WU66 669 aa21.63■■□□□ 1.05
PVT1-219ENST00000523427 PRRC1Q96M27 445 aa21.63■■□□□ 1.05
PVT1-219ENST00000523427 ZNF582Q96NG8 517 aaPredicted RBP21.63■■□□□ 1.05
PVT1-219ENST00000523427 PCGF1Q9BSM1 259 aa21.63■■□□□ 1.05
PVT1-219ENST00000523427 CDADC1Q9BWV3 514 aa21.63■■□□□ 1.05
PVT1-219ENST00000523427 CHIAQ9BZP6 476 aa21.63■■□□□ 1.05
PVT1-219ENST00000523427 WDR76Q9H967 626 aa21.63■■□□□ 1.05
PVT1-219ENST00000523427 C1RLQ9NZP8 487 aa21.63■■□□□ 1.05
PVT1-219ENST00000523427 DOCK11Q5JSL3 2073 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 A0A1B0GUS0 222 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 LRRC30A6NM36 301 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 CTLA4P16410 223 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 PRSS12P56730 875 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 FHL1Q13642 323 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 ZNF362Q5T0B9 420 aaPredicted RBP21.62■■□□□ 1.05
PVT1-219ENST00000523427 AGBL2Q5U5Z8 902 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 FITM2Q8N6M3 262 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 PKP2Q99959 881 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 SH3GL1Q99961 368 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 WACQ9BTA9 647 aa21.62■■□□□ 1.05
PVT1-219ENST00000523427 J3KTA2 159 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 GPR4P46093 362 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 AQP6Q13520 282 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 ZNF404Q494X3 552 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 CCDC92Q53HC0 331 aaPredicted RBP21.61■■□□□ 1.05
PVT1-219ENST00000523427 MESTQ5EB52 335 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 OR5L1Q8NGL2 311 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 C10orf82Q8WW14 230 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 DACT3Q96B18 629 aaPredicted RBP21.61■■□□□ 1.05
PVT1-219ENST00000523427 FNDC11Q9BVV2 318 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 SNX13Q9Y5W8 968 aa21.61■■□□□ 1.05
PVT1-219ENST00000523427 M0QZ24 198 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 RER1O15258 196 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 MLNRO43193 412 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 HLA-DPB1P04440 258 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 PMELP40967 661 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 PRKCDQ05655 676 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 WDR25Q64LD2 544 aaPredicted RBP21.6■■□□□ 1.05
PVT1-219ENST00000523427 ERICH5Q6P6B1 374 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 ZNF583Q96ND8 569 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 ZNF570Q96NI8 536 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 COA3Q9Y2R0 106 aaPredicted RBP21.6■■□□□ 1.05
PVT1-219ENST00000523427 POLR1DQ9Y2S0 133 aa21.6■■□□□ 1.05
PVT1-219ENST00000523427 A0A0G2JND7 137 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 CLPSL1A2RUU4 121 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 PRSS37A4D1T9 235 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 HTR3EA5X5Y0 456 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 OR6C6A6NF89 314 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 IMPA2O14732 288 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 SLC16A7O60669 478 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 SFTPBP07988 381 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 IRF2P14316 349 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 CPT2P23786 658 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 KDELR2P33947 212 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 CENPAP49450 140 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 BEND6Q5SZJ8 279 aaPredicted RBP21.59■■□□□ 1.05
PVT1-219ENST00000523427 TBPL2Q6SJ96 375 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 Q6YL49 198 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 ZNF730Q6ZMV8 503 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 C1orf87Q8N0U7 546 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 PCYOX1LQ8NBM8 494 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 UBE2FQ969M7 185 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 RASD2Q96D21 266 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 MMP27Q9H306 513 aa21.59■■□□□ 1.05
PVT1-219ENST00000523427 PRKDCP78527 4128 aaKnown RBP21.59■■□□□ 1.05
PVT1-219ENST00000523427 TEX13CA0A0J9YWL9 993 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 CD14P08571 375 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 KRTAP10-3P60369 221 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 HOXA4Q00056 320 aaPredicted RBP21.58■■□□□ 1.05
PVT1-219ENST00000523427 TRAM2Q15035 370 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 FBXW12Q6X9E4 464 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 C1QL4Q86Z23 238 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 OR8J3Q8NGG0 315 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 TECTBQ96PL2 329 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 CITED1Q99966 193 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 SLC30A2Q9BRI3 323 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 SYT4Q9H2B2 425 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 MMADHCQ9H3L0 296 aaPredicted RBP21.58■■□□□ 1.05
PVT1-219ENST00000523427 TMEM100Q9NV29 134 aa21.58■■□□□ 1.05
PVT1-219ENST00000523427 C22orf46C9J442 243 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 FXYD1O00168 92 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 CDC42EP2O14613 210 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 KHDRBS3O75525 346 aaKnown RBP21.57■■□□□ 1.04
PVT1-219ENST00000523427 MELTFP08582 738 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 FPR3P25089 353 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 OCLNQ16625 522 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 ANKDD1AQ495B1 522 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 RHOUQ7L0Q8 258 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 BOLLQ8N9W6 283 aaKnown RBP21.57■■□□□ 1.04
PVT1-219ENST00000523427 APOBEC3DQ96AK3 386 aaPredicted RBP21.57■■□□□ 1.04
PVT1-219ENST00000523427 PRDM13Q9H4Q3 707 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 NOX4Q9NPH5 578 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 UFSP2Q9NUQ7 469 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 INTS9Q9NV88 658 aaKnown RBP21.57■■□□□ 1.04
PVT1-219ENST00000523427 TMCC3Q9ULS5 477 aa21.57■■□□□ 1.04
PVT1-219ENST00000523427 TIMM23O14925 209 aa21.56■■□□□ 1.04
PVT1-219ENST00000523427 ENSAO43768 121 aaKnown RBP21.56■■□□□ 1.04
PVT1-219ENST00000523427 ZNF26P17031 533 aaPredicted RBP21.56■■□□□ 1.04
PVT1-219ENST00000523427 RGS6P49758 472 aa21.56■■□□□ 1.04
PVT1-219ENST00000523427 SELENOWP63302 87 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms