RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 GCM1Q9NP62 436 aa12.94□□□□□ -0.34
MRPS28-209ENST00000522987 IL19Q9UHD0 177 aa12.94□□□□□ -0.34
MRPS28-209ENST00000522987 IER3IP1Q9Y5U9 82 aa12.94□□□□□ -0.34
MRPS28-209ENST00000522987 MEGF8Q7Z7M0 2845 aa12.94□□□□□ -0.34
MRPS28-209ENST00000522987 PPIAL4EA0A075B759 164 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 TRAV40A0A0B4J280 105 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 PPIAL4CA0A0B4J2A2 164 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 OR6C6A6NF89 314 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 PPIAL4DF5H284 164 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 F5H5P2 479 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 SURF4O15260 269 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 KHDRBS3O75525 346 aaKnown RBP12.93□□□□□ -0.34
MRPS28-209ENST00000522987 DIRAS1O95057 198 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 HLA-DPB1P04440 258 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 PPIAL4FP0DN26 164 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 MDH2P40926 338 aaKnown RBP12.93□□□□□ -0.34
MRPS28-209ENST00000522987 TSEN54Q7Z6J9 526 aaKnown RBP12.93□□□□□ -0.34
MRPS28-209ENST00000522987 PARP8Q8N3A8 854 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 PTP4A1Q93096 173 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 FAM162AQ96A26 154 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 SSBP3Q9BWW4 388 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-209ENST00000522987 NUAK2Q9H093 628 aa12.93□□□□□ -0.34
MRPS28-209ENST00000522987 HTR3EA5X5Y0 456 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 A8MXK9 166 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 DCTN6O00399 190 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 MLNRO43193 412 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 NDUFB2O95178 105 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 WNT2P09544 360 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 CDKN2AP42771 156 aaKnown RBP12.92□□□□□ -0.34
MRPS28-209ENST00000522987 GSK3BP49841 420 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 GNB2P62879 340 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 SLC9A3R2Q15599 337 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 LEG1Q6P5S2 330 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 SHISA2Q6UWI4 295 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 LYPD2Q6UXB3 125 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 TMPRSS11FQ6ZWK6 438 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 CBLL1Q75N03 491 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 KLBQ86Z14 1044 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 LINC00346Q8IVM7 164 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 GLB1L2Q8IW92 636 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 RNF113BQ8IZP6 322 aaKnown RBP12.92□□□□□ -0.34
MRPS28-209ENST00000522987 SLC7A13Q8TCU3 470 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 RSRC1Q96IZ7 334 aaKnown RBP12.92□□□□□ -0.34
MRPS28-209ENST00000522987 GPA33Q99795 319 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 NMNAT1Q9HAN9 279 aaPredicted RBP12.92□□□□□ -0.34
MRPS28-209ENST00000522987 TMEM165Q9HC07 324 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 RPS6KA6Q9UK32 745 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 SIGLEC7Q9Y286 467 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 V9GYQ6 96 aa12.92□□□□□ -0.34
MRPS28-209ENST00000522987 PPP1R3DO95685 299 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 COX4I1P13073 169 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 RAC2P15153 192 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 MDKP21741 143 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-209ENST00000522987 SDHAP31040 664 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 PMELP40967 661 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 FXYD6P3P58550 94 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 PAX8Q06710 450 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 ANKDD1AQ495B1 522 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 SLC27A4Q6P1M0 643 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 BRD3OSQ6XYD6 125 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 MUC20Q8N307 709 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-209ENST00000522987 OR8G5Q8NG78 346 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 OR52J3Q8NH60 311 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 TMEM246Q9BRR3 403 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 FN3KQ9H479 309 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 VIPAS39Q9H9C1 493 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 SRA1Q9HD15 236 aaKnown RBP12.91□□□□□ -0.34
MRPS28-209ENST00000522987 TMEM5Q9Y2B1 443 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 LRCH1Q9Y2L9 728 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 POLR3KQ9Y2Y1 108 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-209ENST00000522987 LHFPL6Q9Y693 200 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 ENPP4Q9Y6X5 453 aa12.91□□□□□ -0.34
MRPS28-209ENST00000522987 IGHV2-70DA0A0C4DH43 119 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 TRBV4-1A0A0J9YWV2 114 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 PTP4A3O75365 173 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 H1F0P07305 194 aaKnown RBP12.9□□□□□ -0.34
MRPS28-209ENST00000522987 SRSF4Q08170 494 aaKnown RBP12.9□□□□□ -0.34
MRPS28-209ENST00000522987 SEC23BQ15437 767 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 TUSC1Q2TAM9 212 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 PRR31Q5SQ13 230 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 PRAMEF6Q5VXH4 476 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 SPATC1Q76KD6 591 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 NAA40Q86UY6 237 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 CYP4Z1Q86W10 505 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 FAM86B1Q8N7N1 296 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 BOLLQ8N9W6 283 aaKnown RBP12.9□□□□□ -0.34
MRPS28-209ENST00000522987 OR13G1Q8NGZ3 307 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 SLC25A28Q96A46 364 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 ZNF582Q96NG8 517 aaPredicted RBP12.9□□□□□ -0.34
MRPS28-209ENST00000522987 NDEL1Q9GZM8 345 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 NRIP3Q9NQ35 241 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 UFSP2Q9NUQ7 469 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 VSX1Q9NZR4 365 aaPredicted RBP12.9□□□□□ -0.34
MRPS28-209ENST00000522987 AURKCQ9UQB9 309 aa12.9□□□□□ -0.34
MRPS28-209ENST00000522987 UNC119BA6NIH7 251 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 F5H5K5 113 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
MRPS28-209ENST00000522987 FPR3P25089 353 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 OMPP47874 163 aa12.89□□□□□ -0.35
MRPS28-209ENST00000522987 SRP9P49458 86 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms