RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 VN1R1Q9GZP7 353 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 ISYNA1Q9NPH2 558 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 GPR84Q9NQS5 396 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 PLA2G3Q9NZ20 509 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 PMS2P2O95744 297 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 ACER2Q5QJU3 275 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 KANSL1Q7Z3B3 1105 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 CATSPERDQ86XM0 798 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 SIAH3Q8IW03 269 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 OR1L3Q8NH93 324 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 RPL11P62913 178 aaKnown RBP14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 RNPS1Q15287 305 aaKnown RBP14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 PCK2Q16822 640 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 ZDHHC23Q8IYP9 409 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 PLPP5Q8NEB5 264 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 BANF2Q9H503 90 aa14.74□□□□□ -0.05
PCDHA3-201ENST00000522353 IGHV3-15A0A0B4J1V0 119 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 SULT1C4O75897 302 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 CALCBP10092 127 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 B4GALT1P15291 398 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 ELK1P19419 428 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 PRAMEF5Q5TYX0 476 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 PRAMEF6Q5VXH4 476 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 ARPC5LQ9BPX5 153 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 ZMAT3Q9HA38 289 aaKnown RBP14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 PRKNO60260 465 aaPredicted RBP14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 ZNF266Q14584 549 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 IAH1Q2TAA2 248 aaPredicted RBP14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 ANKRD53Q8N9V6 530 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 OR5M9Q8NGP3 310 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 CMTM2Q8TAZ6 248 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 HPSE2Q8WWQ2 592 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 ZDHHC16Q969W1 377 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 LIN37Q96GY3 246 aaPredicted RBP14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 PLK3Q9H4B4 646 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 SCPEP1Q9HB40 452 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 TAS2R4Q9NYW5 299 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 RPH3ALQ9UNE2 315 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 FADS1O60427 444 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 CEACAM16Q2WEN9 425 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 LINC00299Q6ZSB3 139 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 CA5BP1Q8WTZ4 195 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 REEP6Q96HR9 211 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 RANGRFQ9HD47 186 aaPredicted RBP14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 FBXL2Q9UKC9 423 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 IGLV3-16A0A075B6K0 115 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 PMP2P02689 132 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 FOLR1P15328 257 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 COL9A1P20849 921 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 LIPAP38571 399 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 OPCMLQ14982 345 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 RTL8BQ17RB0 113 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 WIPI1Q5MNZ9 446 aaPredicted RBP14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 FAM199XQ6PEV8 388 aaPredicted RBP14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 CMTM4Q8IZR5 234 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 SVBPQ8N300 66 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 SLC25A37Q9NYZ2 338 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 CLEC2DQ9UHP7 191 aa14.73□□□□□ -0.05
PCDHA3-201ENST00000522353 IGHV5-51A0A0C4DH38 117 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 CLN5O75503 358 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 OR8U8P0C7N1 319 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 CASP3P42574 277 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 CLPPQ16740 277 aaPredicted RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 FAM109AQ8N4B1 249 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 TMEM99Q8N816 258 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 OR52N5Q8NH56 324 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 SEC22AQ96IW7 307 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 GABARAPL1Q9H0R8 117 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 SLC39A9Q9NUM3 307 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 TRABD2BA6NFA1 517 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 K7EQM0 130 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 SNRNP70P08621 437 aaKnown RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 AADACP22760 399 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 SMIM21Q3B7S5 101 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 PHLDA2Q53GA4 152 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 ELFN2Q5R3F8 820 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 RDH5Q92781 318 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 APOBEC3DQ96AK3 386 aaPredicted RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 GNB4Q9HAV0 340 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 PEX11BO96011 259 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 CPEP16870 476 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 TBPP20226 339 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 GPR12P47775 334 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 MRPS34P82930 218 aaKnown RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 OR6K3Q8NGY3 331 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 ZNF705FA8MVS1 300 aaPredicted RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 HSD17B6O14756 317 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 ZNF705DP0CH99 300 aaPredicted RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 ZNF705BP0CI00 300 aaPredicted RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 EMDP50402 254 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 TRILQ7L0X0 811 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 FBXO17Q96EF6 278 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 MBOAT4Q96T53 435 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 FOXB1Q99853 325 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 ZFP64Q9NPA5 681 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 PRDM7Q9NQW5 492 aa14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 TPRP12270 2363 aaKnown RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 DDX60LQ5H9U9 1706 aaKnown RBP14.72□□□□□ -0.05
PCDHA3-201ENST00000522353 A0A0B4J2A0 478 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms