RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MAGEA1P43355 309 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 RND2P52198 227 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 NCBP2P52298 156 aaKnown RBP eCLIP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 DAOAP59103 153 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ACTA2P62736 377 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ACTG2P63267 376 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ACTC1P68032 377 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ACTA1P68133 377 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ADARB1P78563 741 aaKnown RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 PSG7Q13046 419 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 DOC2AQ14183 400 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 PON3Q15166 354 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF79Q15937 498 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 HADHQ16836 314 aaKnown RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 PAGE3Q5JUK9 113 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 FAM122BQ7Z309 247 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 CBLN2Q8IUK8 224 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF584Q8IVC4 421 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 APRG1Q8IVJ8 170 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 MICU2Q8IYU8 434 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 EID2Q8N6I1 236 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF321PQ8N8H1 164 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 LRRC75AQ8NAA5 344 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 BBOF1Q8ND07 529 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR52K1Q8NGK4 314 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR1N2Q8NGR9 330 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 NUBPLQ8TB37 319 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF502Q8TBZ5 544 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 SLC7A13Q8TCU3 470 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ACER1Q8TDN7 264 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 GPX8Q8TED1 209 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ANKRD49Q8WVL7 239 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 CAPSLQ8WWF8 208 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 PIK3IP1Q96FE7 263 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 IMMP1LQ96LU5 166 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 XPO6Q96QU8 1125 aaKnown RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 OSBPL10Q9BXB5 764 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 CYP3A43Q9HB55 503 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 RETNQ9HD89 108 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 CTPS2Q9NRF8 586 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 RCL1Q9Y2P8 373 aaKnown RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 CCDC171Q6TFL3 1326 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 KDM6AO15550 1401 aaPredicted RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 NHSQ6T4R5 1651 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 RGPD3A6NKT7 1758 aaPredicted RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 RGPD4Q7Z3J3 1758 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 RBBP6Q7Z6E9 1792 aaKnown RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF646O15015 1829 aaPredicted RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 DENND4AQ7Z401 1863 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNFX1Q9P2E3 1918 aaKnown RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 TP53BP1Q12888 1972 aaPredicted RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 LOXHD1Q8IVV2 1947 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 CACNA1SQ13698 1873 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 STRCQ7RTU9 1775 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 COL16A1Q07092 1604 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF609O15014 1411 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 UQCRHLA0A096LP55 91 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 PRSS37A4D1T9 235 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 SMCO2A6NFE2 343 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 CDC7O00311 574 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 DYNC1I1O14576 645 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 AIM2O14862 343 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 PPP1R2P9O14990 202 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 SIVA1O15304 175 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 DPM1O60762 260 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 SRP72O76094 671 aaKnown RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 IGLV1-47P01700 117 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 UQCRHP07919 91 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 UBTFL6P0CB48 400 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 SMIM10L1P0DMW3 83 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF17P17021 662 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 ATF6P18850 670 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 MSNP26038 577 aaKnown RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 LHX2P50458 406 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 RPS15AP62244 130 aaKnown RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 RAB11AP62491 216 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 ORC2Q13416 577 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 RAB11BQ15907 218 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 LRRC10Q5BKY1 277 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZFP41Q8N8Y5 198 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 DCAF4L2Q8NA75 395 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 FAM184AQ8NB25 1140 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR10J6PQ8NGY7 276 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR5B3Q8NH48 314 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR5K2Q8NHB8 316 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 LYPD6BQ8NI32 183 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 CXorf40AQ8TE69 158 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 SMIM10Q96HG1 83 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR2M2Q96R28 347 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 NRTNQ99748 197 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 HES7Q9BYE0 225 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 MRPL37Q9BZE1 423 aaKnown RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 UCK2Q9BZX2 261 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 ACTR3CQ9C0K3 210 aaPredicted RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 ROGDIQ9GZN7 287 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 FBXO44Q9H4M3 255 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 RPF2Q9H7B2 306 aaKnown RBP2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 ACP6Q9NPH0 428 aa2.29□□□□□ -2.04
HMGN1P28-201ENST00000521340 SLC25A37Q9NYZ2 338 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms