RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 MAPK11Q15759 364 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 SMU1Q2TAY7 513 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 CEACAM16Q2WEN9 425 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 ELFN2Q5R3F8 820 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 CARD17Q5XLA6 110 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF836Q6ZNA1 936 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF329Q86UD4 541 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 TBC1D26Q86UD7 250 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 MDP1Q86V88 176 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 LRP11Q86VZ4 500 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 NUDCD3Q8IVD9 361 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 PEX5LQ8IYB4 626 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF440Q8IYI8 595 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 GPR137CQ8N3F9 429 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF781Q8N8C0 355 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 SGMS2Q8NHU3 365 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 KIF18AQ8NI77 898 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 ZFAND2BQ8WV99 257 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 RDH5Q92781 318 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 PKNOX2Q96KN3 472 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF317Q96PQ6 595 aaPredicted RBP4.94□□□□□ -1.62
PABPC1-216ENST00000520868 PANX1Q96RD7 426 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 MRPL37Q9BZE1 423 aaKnown RBP4.94□□□□□ -1.62
PABPC1-216ENST00000520868 LINC00470Q9BZP3 86 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 PPCSQ9HAB8 311 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 NOX3Q9HBY0 568 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 BTNL2Q9UIR0 455 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 FZR1Q9UM11 496 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 GRIP1Q9Y3R0 1128 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 MEGF8Q7Z7M0 2845 aa4.94□□□□□ -1.62
PABPC1-216ENST00000520868 LOC105371242A0A075B767 164 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 CBY3A6NI87 242 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 FTCDNL1E5RQL4 147 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 RPL36A-HNRNPH2H7BZ11 118 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 M0R233 179 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 SYNGR3O43761 229 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 RGS11O94810 467 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 MSMBP08118 114 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 NUDT17P0C025 328 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 SAGP10523 405 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 CD79AP11912 226 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 LBPP18428 481 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 RPS4Y1P22090 263 aaKnown RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 ACHEP22303 614 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 CBLP22681 906 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 CHATP28329 748 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 GTF2E2P29084 291 aaKnown RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 CRATP43155 626 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 CLNS1AP54105 237 aaKnown RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 SH3BGRP55822 239 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 HILS1P60008 231 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 HOXC5Q00444 222 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 SCGB2A2Q13296 93 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 MAD2L1BPQ15013 274 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 CHI3L2Q15782 390 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 TRMT5Q32P41 509 aaKnown RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 ALKBH6Q3KRA9 238 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 SLC9B1Q4ZJI4 515 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 LIN52Q52LA3 116 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 ESCO2Q56NI9 601 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF311Q5JNZ3 666 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 PHYHD1Q5SRE7 291 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 GKAP1Q5VSY0 366 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 FAM122CQ6P4D5 195 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 TRIML2Q8N7C3 387 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 OR51F2Q8NH61 342 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 MFSD8Q8NHS3 518 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 YIPF5Q969M3 257 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 MRPL24Q96A35 216 aaKnown RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 TESCQ96BS2 214 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 ZMYND19Q96E35 227 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 TEX37Q96LM6 180 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 CCDC115Q96NT0 180 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 OXGR1Q96P68 337 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 ZIM3Q96PE6 472 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 EMC6Q9BV81 110 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 NUF2Q9BZD4 464 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 TCF7L2Q9NQB0 619 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF275Q9NSD4 429 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 B3GNT2Q9NY97 397 aa4.93□□□□□ -1.62
PABPC1-216ENST00000520868 MYEF2Q9P2K5 600 aaKnown RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF443Q9Y2A4 671 aaPredicted RBP4.93□□□□□ -1.62
PABPC1-216ENST00000520868 A0A096LPI6 279 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 A0A0B4J293 547 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 A0A1W2PPW3 197 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 hDV102S1A0JD36 115 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF99A8MXY4 864 aaPredicted RBP4.92□□□□□ -1.62
PABPC1-216ENST00000520868 E9PBE3 544 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 HSPA12AO43301 675 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 NPIPB7O75200 414 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 KRT75O95678 551 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 PNPP00491 289 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 TFP02787 698 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 BCHEP06276 602 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 PATE4P0C8F1 98 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 ZNF35P13682 527 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 HLA-DOBP13765 273 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 ETFAP13804 333 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 ADRA2CP18825 462 aa4.92□□□□□ -1.62
PABPC1-216ENST00000520868 IL12AP29459 219 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms