RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 ROM1Q03395 351 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 RAB39AQ14964 217 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 CCDC92Q53HC0 331 aaPredicted RBP12.3□□□□□ -0.44
SDC2-203ENST00000519587 DEGS2Q6QHC5 323 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 ARL9Q6T311 187 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 TMPRSS11AQ6ZMR5 421 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 MEX3BQ6ZN04 569 aaKnown RBP12.3□□□□□ -0.44
SDC2-203ENST00000519587 KCTD20Q7Z5Y7 419 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 EGFL6Q8IUX8 553 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 DMRTC2Q8IXT2 367 aaPredicted RBP12.3□□□□□ -0.44
SDC2-203ENST00000519587 SLC30A7Q8NEW0 376 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 FGFBP3Q8TAT2 258 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 NR1H4Q96RI1 486 aaPredicted RBP12.3□□□□□ -0.44
SDC2-203ENST00000519587 ALG8Q9BVK2 526 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 ESRP2Q9H6T0 727 aaKnown RBP12.3□□□□□ -0.44
SDC2-203ENST00000519587 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 NOX3Q9HBY0 568 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 ERVK13-1Q9NX77 482 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 COPS3Q9UNS2 423 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 KLHDC2Q9Y2U9 406 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 PCDHGB5Q9Y5G0 923 aa12.3□□□□□ -0.44
SDC2-203ENST00000519587 GOSR1O95249 250 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 THBDP07204 575 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 TACSTD2P09758 323 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 IGFBP2P18065 325 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 CRYGSP22914 178 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 APEX1P27695 318 aaKnown RBP12.29□□□□□ -0.44
SDC2-203ENST00000519587 OPRL1P41146 370 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 RIDAP52758 137 aaKnown RBP12.29□□□□□ -0.44
SDC2-203ENST00000519587 HCCSP53701 268 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 NR1H2P55055 460 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 TPTEP56180 551 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 GALEQ14376 348 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 ZNF829Q3KNS6 432 aaPredicted RBP12.29□□□□□ -0.44
SDC2-203ENST00000519587 BEX5Q5H9J7 111 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 ZNF544Q6NX49 715 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 UNQ6126/PRO20091Q6UXV3 157 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 SPATC1Q76KD6 591 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 PRSS48Q7RTY5 328 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 ZNF679Q8IYX0 411 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 KLHL36Q8N4N3 616 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 LINC01560Q8TB33 94 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 HAVCR2Q8TDQ0 301 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 SMAP2Q8WU79 429 aaPredicted RBP12.29□□□□□ -0.44
SDC2-203ENST00000519587 OR8B4Q96RC9 309 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 DCLRE1CQ96SD1 692 aaKnown RBP12.29□□□□□ -0.44
SDC2-203ENST00000519587 RHNO1Q9BSD3 238 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 C1QTNF6Q9BXI9 259 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 TTTY10Q9BZA0 68 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 CCDC90BQ9GZT6 254 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 DUSP21Q9H596 190 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 SP140LQ9H930 580 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 PNRC2Q9NPJ4 139 aaKnown RBP12.29□□□□□ -0.44
SDC2-203ENST00000519587 ERGIC3Q9Y282 383 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 SNX5Q9Y5X3 404 aa12.29□□□□□ -0.44
SDC2-203ENST00000519587 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
SDC2-203ENST00000519587 IGHV1-18A0A0C4DH31 117 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 C5orf49A4QMS7 147 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 METTL15A6NJ78 407 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 SULT1C4O75897 302 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 CRYAAP02489 173 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 CECR9P0C854 216 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 RGS6P49758 472 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 GALK2Q01415 458 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
SDC2-203ENST00000519587 CDONQ4KMG0 1287 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 RNLSQ5VYX0 342 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 SEZ6L2Q6UXD5 910 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 LRRN1Q6UXK5 716 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 ZNF584Q8IVC4 421 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 SYS1Q8N2H4 156 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 SVOPQ8N4V2 548 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 RFLNBQ8N5W9 214 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 YIPF7Q8N8F6 280 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 CPEB3Q8NE35 698 aaKnown RBP12.28□□□□□ -0.44
SDC2-203ENST00000519587 OR10S1Q8NGN2 331 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 OR52N1Q8NH53 320 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 MS4A3Q96HJ5 214 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 ZNF75AQ96N20 296 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 AMELYQ99218 206 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 KCNJ15Q99712 375 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 SPOCK3Q9BQ16 436 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 MND1Q9BWT6 205 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 CDCA4Q9BXL8 241 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 PAK1IP1Q9NWT1 392 aaPredicted RBP12.28□□□□□ -0.44
SDC2-203ENST00000519587 NPAP1Q9NZP6 1156 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 GNG8Q9UK08 70 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 CAB39Q9Y376 341 aaPredicted RBP12.28□□□□□ -0.44
SDC2-203ENST00000519587 LRP12Q9Y561 859 aa12.28□□□□□ -0.44
SDC2-203ENST00000519587 C2CD3Q4AC94 2353 aa12.27□□□□□ -0.44
SDC2-203ENST00000519587 TMEM129A0AVI4 362 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 A1L4Q6 167 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 C19orf84I3L1E1 186 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 M0R135 149 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 MT-ND5P03915 603 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 LIMS3P0CW19 117 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 LIMS4P0CW20 117 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 COX6B1P14854 86 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 CD40P25942 277 aa12.27□□□□□ -0.45
SDC2-203ENST00000519587 DCTDP32321 178 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms