RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 H2BFMP0C1H6 154 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 PATE4P0C8F1 98 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 RNF224P0DH78 156 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 CD40P25942 277 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 RAD52P43351 418 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 HTR5AP47898 357 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 ZNF83P51522 516 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 IDH3GP51553 393 aaPredicted RBP8.23□□□□□ -1.09
CLN8-203ENST00000518780 TUBA1BP68363 451 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 TUBA4AP68366 448 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 DBPQ10586 325 aaPredicted RBP8.23□□□□□ -1.09
CLN8-203ENST00000518780 RAB39AQ14964 217 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 KRTAP27-1Q3LI81 207 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 KCTD21Q4G0X4 260 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 CDONQ4KMG0 1287 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 NCMAPQ5T1S8 102 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 ZNF684Q5T5D7 378 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 SP5Q6BEB4 398 aaPredicted RBP8.23□□□□□ -1.09
CLN8-203ENST00000518780 CORO6Q6QEF8 472 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 DRAM2Q6UX65 266 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 MEX3BQ6ZN04 569 aaKnown RBP8.23□□□□□ -1.09
CLN8-203ENST00000518780 CFAP77Q6ZQR2 320 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 C22orf34Q6ZV56 151 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 TUBA1AQ71U36 451 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 PRSS48Q7RTY5 328 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 KRT77Q7Z794 578 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 ZNF584Q8IVC4 421 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 HTRA1Q92743 480 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 KCNJ15Q99712 375 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 ELOVL3Q9HB03 270 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 CDH20Q9HBT6 801 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 NOX3Q9HBY0 568 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 PNRC2Q9NPJ4 139 aaKnown RBP8.23□□□□□ -1.09
CLN8-203ENST00000518780 CENPMQ9NSP4 180 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 TBCCD1Q9NVR7 557 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 ERVK13-1Q9NX77 482 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 CRIM1Q9NZV1 1036 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 EIF3KQ9UBQ5 218 aaKnown RBP8.23□□□□□ -1.09
CLN8-203ENST00000518780 ERGIC3Q9Y282 383 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 CAB39Q9Y376 341 aaPredicted RBP8.23□□□□□ -1.09
CLN8-203ENST00000518780 RELNP78509 3460 aa8.23□□□□□ -1.09
CLN8-203ENST00000518780 A0A1W2PR80 420 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 TMEM129A0AVI4 362 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 TRIM64A6NGJ6 449 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 C19orf84I3L1E1 186 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 M0R1B8 84 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 RGS10O43665 173 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 CLDN1O95832 211 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 MT-ND5P03915 603 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 CD3EP07766 207 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 CECR9P0C854 216 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 ZNF35P13682 527 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 COX6B1P14854 86 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 EEF1B2P24534 225 aaKnown RBP8.22□□□□□ -1.09
CLN8-203ENST00000518780 APEX1P27695 318 aaKnown RBP8.22□□□□□ -1.09
CLN8-203ENST00000518780 HSD11B1P28845 292 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 RPS27P42677 84 aaKnown RBP8.22□□□□□ -1.09
CLN8-203ENST00000518780 MMP16P51512 607 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 CHN2P52757 468 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 RIDAP52758 137 aaKnown RBP8.22□□□□□ -1.09
CLN8-203ENST00000518780 NAAAQ02083 359 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 ZNF85Q03923 595 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 ZNF829Q3KNS6 432 aaPredicted RBP8.22□□□□□ -1.09
CLN8-203ENST00000518780 ZNF544Q6NX49 715 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 TMEM154Q6P9G4 183 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 COLCA1Q6ZS62 124 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 AHSA2Q719I0 299 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 FAM220AQ7Z4H9 259 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 KLHL36Q8N4N3 616 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 OR52H1Q8NGJ2 320 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 OR5L1Q8NGL2 311 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 OR10S1Q8NGN2 331 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 OR52N1Q8NH53 320 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 AKR7LQ8NHP1 331 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 ZC3HAV1LQ96H79 300 aaKnown RBP8.22□□□□□ -1.09
CLN8-203ENST00000518780 BCL2L14Q9BZR8 327 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 MOB1AQ9H8S9 216 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 NPAP1Q9NZP6 1156 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 ZNF391Q9UJN7 358 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 IKZF2Q9UKS7 526 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 COPS3Q9UNS2 423 aa8.22□□□□□ -1.09
CLN8-203ENST00000518780 SPTAN1Q13813 2472 aaKnown RBP8.21□□□□□ -1.09
CLN8-203ENST00000518780 LOC100509620A0A075B734 347 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 IGHV2OR16-5A0A0B4J2B6 119 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.21□□□□□ -1.1
CLN8-203ENST00000518780 C5orf49A4QMS7 147 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 DPRXA6NFQ7 191 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 H3BSA7 217 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 M0R135 149 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 APOL3O95236 402 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 ACSM4P0C7M7 580 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 LIMS3P0CW19 117 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 LIMS4P0CW20 117 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 PSKH1P11801 424 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 CFL1P23528 166 aaKnown RBP8.21□□□□□ -1.1
CLN8-203ENST00000518780 HCCSP53701 268 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 PSMA6P60900 246 aaKnown RBP8.21□□□□□ -1.1
CLN8-203ENST00000518780 RPS23P62266 143 aaKnown RBP8.21□□□□□ -1.1
CLN8-203ENST00000518780 GALK2Q01415 458 aa8.21□□□□□ -1.1
CLN8-203ENST00000518780 RSPO1Q2MKA7 263 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms