RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 VWC2LB2RUY7 222 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 EEF1E1-BLOC1S5C9J1V9 151 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PRR23D1E9PI22 279 aaPredicted RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 C16orf97H3BN30 126 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SOCS2O14508 198 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZNHIT1O43257 154 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LRRTM2O43300 516 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 EEF1E1O43324 174 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZG16O60844 167 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MITFO75030 526 aaPredicted RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 KHDRBS3O75525 346 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 UPK3AO75631 287 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GLCEO94923 617 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 UBL3O95164 117 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 FARS2O95363 451 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TNFRSF6BO95407 300 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SOX14O95416 240 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PPP1R3DO95685 299 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 BAG2O95816 211 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IGKV3-15P01624 115 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IGLV1-44P01699 117 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 OPN1LWP04000 364 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IL6RP08887 468 aaPredicted RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CST2P09228 141 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 NPSP0C0P6 89 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PRR23D2P0DMB1 279 aaPredicted RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 COX5BP10606 129 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PIPP12273 146 aaPredicted RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 POU2F1P14859 743 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CTLA4P16410 223 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 EGR1P18146 543 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GABRB1P18505 474 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PTNP21246 168 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MSR1P21757 451 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 BMP5P22003 454 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PRKACGP22612 351 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SLC2A5P22732 501 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IGHV1-2P23083 117 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IL32P24001 234 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 EDNRAP25101 427 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LAP3P28838 519 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 EPHA2P29317 976 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 HTR1FP30939 366 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CCKARP32238 428 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ACVR1BP36896 505 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CAPGP40121 348 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CD79BP40259 229 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CDKN2AP42771 156 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CAPZA2P47755 286 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZNF84P51523 738 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CDC42P60953 191 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CXCR4P61073 352 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SNRPGP62308 76 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LSM6P62312 80 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ERVK-25P63136 954 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CSNK2BP67870 215 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ACTC1P68032 377 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ACTA1P68133 377 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SIRPAP78324 504 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ADARB1P78563 741 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ROR2Q01974 943 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 HSF2Q03933 536 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 RUNX1T1Q06455 604 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SRSF1Q07955 248 aaKnown RBP eCLIP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LGALS3BPQ08380 585 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CD47Q08722 323 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PMPCAQ10713 525 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 AQP6Q13520 282 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CAMK2DQ13557 499 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CRMP1Q14194 572 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GGTLC2Q14390 218 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MELKQ14680 651 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GINS1Q14691 196 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 PTGES3Q15185 160 aaKnown RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IGFBP7Q16270 282 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 GABRA6Q16445 453 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CEACAM16Q2WEN9 425 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TBRG1Q3YBR2 411 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TEX30Q5JUR7 227 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 CLEC12AQ5QGZ9 265 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TIMM23BQ5SRD1 257 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LINC01590Q5TEZ4 76 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 TSPO2Q5TGU0 170 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LCN1P1Q5VSP4 162 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 FAM27BQ5VT28 67 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZNF691Q5VV52 312 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 MEDAGQ5VYS4 303 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LPCAT4Q643R3 524 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IGFL4Q6B9Z1 124 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ACSM5Q6NUN0 579 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 LEG1Q6P5S2 330 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ANKRD16Q6P6B7 361 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 SLC25A47Q6Q0C1 308 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 DEGS2Q6QHC5 323 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 ZNF474Q6S9Z5 364 aaPredicted RBP1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 IZUMO2Q6UXV1 221 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 STAC2Q6ZMT1 411 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 C3P1Q6ZMU1 363 aa1.91□□□□□ -2.1
SCARNA16.3-201ENST00000516595 NCCRP1Q6ZVX7 275 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms