RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 WDR88Q6ZMY6 472 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 DPY19L2P2Q6ZN68 376 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 OLIG3Q7RTU3 272 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 METTL27Q8N6F8 245 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 CSNK1A1LQ8N752 337 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ASCC1Q8N9N2 400 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 SLC37A3Q8NCC5 494 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 OR7G1Q8NGA0 311 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 OR6C4Q8NGE1 309 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 OR5W2Q8NH69 310 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 FAM3CQ92520 227 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 TMEM203Q969S6 136 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 TSACCQ96A04 125 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 ANKRD9Q96BM1 317 aaPredicted RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 ERLEC1Q96DZ1 483 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 SGTBQ96EQ0 304 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 RNF170Q96K19 258 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 PGLYRP3Q96LB9 341 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 NEDD4LQ96PU5 975 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 DDOQ99489 341 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ACTR6Q9GZN1 396 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 RAB33BQ9H082 229 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 MMP28Q9H239 520 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 TPK1Q9H3S4 243 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ERVMER34-1Q9H9K5 563 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 TBC1D17Q9HA65 648 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 ADGRL4Q9HBW9 690 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 EXOSC3Q9NQT5 275 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 DIABLOQ9NR28 239 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 CTPS2Q9NRF8 586 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 DDX28Q9NUL7 540 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 HRASLS2Q9NWW9 162 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 COMMD3Q9UBI1 195 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 EXTL2Q9UBQ6 330 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 RPS6KB2Q9UBS0 482 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 EPHA6Q9UF33 1036 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 CHRNA9Q9UGM1 479 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 POMT2Q9UKY4 750 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 MMP17Q9ULZ9 603 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 NDRG2Q9UN36 371 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 MOKQ9UQ07 419 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 YARS2Q9Y2Z4 477 aaKnown RBP3.32□□□□□ -1.88
CAST-242ENST00000515063 MMACHCQ9Y4U1 282 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 RNF215Q9Y6U7 377 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 CACNA1AO00555 2505 aa3.32□□□□□ -1.88
CAST-242ENST00000515063 SPTY2D1-AS1A0A0U1RR47 76 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 C2orf92A0A1B0GVN3 265 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 A0A1W2PS18 150 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 C7orf66A4D0T2 115 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SERINC4A6NH21 518 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 LILRA5A6NI73 299 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ZNF879B4DU55 563 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 H0YIG0 161 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 VCYO14598 125 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PDCD5O14737 125 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PHYHO14832 338 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SPINT2O43291 252 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 OR10H2O60403 315 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 HPGDSO60760 199 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 OR7A10O76100 309 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 GLCEO94923 617 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SLC2A10O95528 541 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 LDOC1O95751 146 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 SEMA4FO95754 770 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 TXNDC12O95881 172 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ECDO95905 644 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 EGFP01133 1207 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 RAF1P04049 648 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 TACSTD2P09758 323 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 UCHL1P09936 223 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CT62P0C5K7 136 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CALCBP10092 127 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PNMTP11086 282 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PRG2P13727 222 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 ELK1P19419 428 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 AHCYP23526 432 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 AZGP1P25311 298 aaKnown RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 SHC1P29353 583 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 BDKRB2P30411 391 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SLC6A1P30531 599 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 MAT2AP31153 395 aaKnown RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 CD79BP40259 229 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 SLC6A8P48029 635 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PITPNBP48739 271 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 MMP15P51511 669 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 TPMTP51580 245 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 HSD17B7P56937 341 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 VSX2P58304 361 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 RRAS2P62070 204 aaPredicted RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 RPS4XP62701 263 aaKnown RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 SIRPAP78324 504 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 MRPS15P82914 257 aaKnown RBP3.31□□□□□ -1.88
CAST-242ENST00000515063 HOXC5Q00444 222 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CHAF1BQ13112 559 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 MAB21L1Q13394 359 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 TNK1Q13470 666 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CRMP1Q14194 572 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 CDK5R1Q15078 307 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PON3Q15166 354 aa3.31□□□□□ -1.88
CAST-242ENST00000515063 PNLIPRP3Q17RR3 467 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 1066.3 ms