RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 RNF121Q9H920 327 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 PLEK2Q9NYT0 353 aa10.41□□□□□ -0.74
PDLIM5-220ENST00000514830 ITPR2Q14571 2701 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 RTTNQ86VV8 2226 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 DAPL1A0PJW8 107 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 J3QW42 95 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 RGS10O43665 173 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 APOL3O95236 402 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 ABHD16AO95870 558 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 APOC1P02654 83 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 HTR1AP08908 422 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 ADRA2AP08913 450 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 MYL12AP19105 171 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 PTAFRP25105 342 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 HCCSP53701 268 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 TUBA1BP68363 451 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 TUBA4AP68366 448 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 PIGFQ07326 219 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 MRPL28Q13084 256 aaKnown RBP10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 RSPO1Q2MKA7 263 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 OTPQ5XKR4 325 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF774Q6NX45 483 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 TUBA1AQ71U36 451 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF485Q8NCK3 441 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 OR52N1Q8NH53 320 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 AKR7LQ8NHP1 331 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 SMAP2Q8WU79 429 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 THEM6Q8WUY1 208 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 POM121L2Q96KW2 1035 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 MROQ9BYG7 248 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 ZNF696Q9H7X3 374 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 NPAP1Q9NZP6 1156 aa10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 CAB39Q9Y376 341 aaPredicted RBP10.4□□□□□ -0.74
PDLIM5-220ENST00000514830 TEP1Q99973 2627 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 LOC100509620A0A075B734 347 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 IGHV1-18A0A0C4DH31 117 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 A0A1W2PR80 420 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 A1L4Q6 167 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 METTL15A6NJ78 407 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 ACOD1A6NK06 481 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 PRR32B1ATL7 298 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 PTGES3LE9PB15 166 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 C19orf84I3L1E1 186 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 TACSTD2P09758 323 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 CECR9P0C854 216 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 ZNF35P13682 527 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 STOMP27105 288 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 PCSK6P29122 969 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 C21orf33P30042 268 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 KIR2DL3P43628 341 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 ETV1P50549 477 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 MVKQ03426 396 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 RAB39AQ14964 217 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 DAZAP2Q15038 168 aaPredicted RBP10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 FDX2Q6P4F2 183 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 DRAM2Q6UX65 266 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 TMEM108Q6UXF1 575 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 SSX6Q7RTT6 188 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 KRT77Q7Z794 578 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 C1orf174Q8IYL3 243 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 RFLNBQ8N5W9 214 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 SLC30A7Q8NEW0 376 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 SPTSSAQ969W0 71 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 KCNJ15Q99712 375 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 ALG8Q9BVK2 526 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 SLCO1C1Q9NYB5 712 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 ERVK-18Q9QC07 812 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 MRM2Q9UI43 246 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 LRP12Q9Y561 859 aa10.39□□□□□ -0.75
PDLIM5-220ENST00000514830 TRIM64CA6NLI5 447 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 SRSF10O75494 262 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 CLDN1O95832 211 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 KRT8P05787 483 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 H2BFMP0C1H6 154 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 ACSM4P0C7M7 580 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 TUBG1P23258 451 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 CD40P25942 277 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 APEX1P27695 318 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 APLNRP35414 380 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 HTR5AP47898 357 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 RGS6P49758 472 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 GDI2P50395 445 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 MMP16P51512 607 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 IDH3GP51553 393 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 RIDAP52758 137 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 NR1H2P55055 460 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 TPTEP56180 551 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 ACSM1Q08AH1 577 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 TBCEQ15813 527 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 TBC1D28Q2M2D7 210 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 BEX5Q5H9J7 111 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 NCMAPQ5T1S8 102 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 HIST2H2BCQ6DN03 193 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 ZNF773Q6PK81 442 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 TMPRSS11AQ6ZMR5 421 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 LHFPL3Q86UP9 236 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 KLHL36Q8N4N3 616 aa10.38□□□□□ -0.75
PDLIM5-220ENST00000514830 NANOGP1Q8N7R0 232 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms