RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ATF6BQ99941 703 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 GABARAPL3Q9BY60 117 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 PRRG3Q9BZD7 231 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 OR2J1Q9GZK6 312 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 BARX1Q9HBU1 254 aaPredicted RBP11.97□□□□□ -0.49
USP46-209ENST00000514536 DYNLRB1Q9NP97 96 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 PNRC2Q9NPJ4 139 aaKnown RBP11.97□□□□□ -0.49
USP46-209ENST00000514536 TBCCD1Q9NVR7 557 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 USE1Q9NZ43 259 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 STARD10Q9Y365 291 aa11.97□□□□□ -0.49
USP46-209ENST00000514536 A0A1W2PPW3 197 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 ERICH4A6NGS2 130 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 F5H5K5 113 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 PRODHO43272 600 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 LY6HO94772 140 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 SLC2A5P22732 501 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 GCH1P30793 250 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 ALDH3B1P43353 468 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 PPOXP50336 477 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 ALDH3A2P51648 485 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 NUDT6P53370 316 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 KLF3P57682 345 aaPredicted RBP11.96□□□□□ -0.49
USP46-209ENST00000514536 EFNB1P98172 346 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 ECH1Q13011 328 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 APOFQ13790 326 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 PCK2Q16822 640 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 CLEC12BQ2HXU8 276 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 ZIK1Q3SY52 487 aaPredicted RBP11.96□□□□□ -0.49
USP46-209ENST00000514536 ZBTB49Q6ZSB9 765 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 DPY19L4Q7Z388 723 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 BCDIN3DQ7Z5W3 292 aaKnown RBP11.96□□□□□ -0.49
USP46-209ENST00000514536 C1orf174Q8IYL3 243 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 OR10S1Q8NGN2 331 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 OR6N2Q8NGY6 317 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 SORCS2Q96PQ0 1159 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 IL4I1Q96RQ9 567 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 DCLRE1CQ96SD1 692 aaKnown RBP11.96□□□□□ -0.49
USP46-209ENST00000514536 SLC29A1Q99808 456 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 C9orf16Q9BUW7 83 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 MARCH7Q9H992 704 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 CENPMQ9NSP4 180 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 TAAR3PQ9P1P4 343 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 FBXO9Q9UK97 447 aaPredicted RBP11.96□□□□□ -0.49
USP46-209ENST00000514536 ORC6Q9Y5N6 252 aa11.96□□□□□ -0.49
USP46-209ENST00000514536 IGLV3-9A0A075B6K5 115 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 M0R233 179 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 F12P00748 615 aaPredicted RBP11.96□□□□□ -0.5
USP46-209ENST00000514536 MPV17P39210 176 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 EFNA4P52798 201 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 RAD23AP54725 363 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 EIF2B1Q14232 305 aaKnown RBP11.96□□□□□ -0.5
USP46-209ENST00000514536 SLC35D3Q5M8T2 416 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 NAA40Q86UY6 237 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 TIGD4Q8IY51 512 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 TMEM163Q8TC26 289 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 KLF14Q8TD94 323 aaPredicted RBP11.96□□□□□ -0.5
USP46-209ENST00000514536 TEAD3Q99594 435 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 RAB1BQ9H0U4 201 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 POFUT1Q9H488 388 aa11.96□□□□□ -0.5
USP46-209ENST00000514536 H2AFY2Q9P0M6 372 aaPredicted RBP11.96□□□□□ -0.5
USP46-209ENST00000514536 MED13LQ71F56 2210 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 SELENOFO60613 162 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 ACSM4P0C7M7 580 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 CD99P14209 185 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 TAF13Q15543 124 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 NKPD1Q17RQ9 610 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 KRTAP27-1Q3LI81 207 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 MBNL2Q5VZF2 373 aaKnown RBP11.95□□□□□ -0.5
USP46-209ENST00000514536 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 SHFQ7M4L6 423 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 ST7LQ8TDW4 575 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 EME1Q96AY2 570 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 SLAMF6Q96DU3 332 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 TPK1Q9H3S4 243 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 MS4A5Q9H3V2 200 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 SLCO1C1Q9NYB5 712 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 GPR160Q9UJ42 338 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 C2CD3Q4AC94 2353 aa11.95□□□□□ -0.5
USP46-209ENST00000514536 CCDC182A6NF36 153 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 TRIM64A6NGJ6 449 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 TRIM64BA6NI03 449 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 IGHV3-13P01766 116 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 NAT2P11245 290 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 NAA10P41227 235 aaPredicted RBP11.94□□□□□ -0.5
USP46-209ENST00000514536 RGS6P49758 472 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 TPTEP56180 551 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 MOGQ16653 247 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 TMEM255AQ5JRV8 349 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 AADACL4Q5VUY2 407 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 IPCEF1Q8WWN9 437 aaPredicted RBP11.94□□□□□ -0.5
USP46-209ENST00000514536 SPTSSAQ969W0 71 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 APOBEC3DQ96AK3 386 aaPredicted RBP11.94□□□□□ -0.5
USP46-209ENST00000514536 COPS4Q9BT78 406 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 ABHD6Q9BV23 337 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
USP46-209ENST00000514536 DDX28Q9NUL7 540 aaKnown RBP11.94□□□□□ -0.5
USP46-209ENST00000514536 ARFGEF3Q5TH69 2177 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 LCATP04180 440 aa11.93□□□□□ -0.5
USP46-209ENST00000514536 ERCC1P07992 297 aaPredicted RBP11.93□□□□□ -0.5
USP46-209ENST00000514536 ANPEPP15144 967 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms