RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TCRBV5S2A0A599 114 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 PLPP2O43688 288 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 IDH3BO43837 385 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 RENP00797 406 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 IGHV2-70P01814 119 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 RAC2P15153 192 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 TNFSF4P23510 183 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 MNAT1P51948 309 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 HMGA2P52926 109 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 MXRA7P84157 204 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 DBPQ10586 325 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 HNRNPA0Q13151 305 aaKnown RBP8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 KRTAP27-1Q3LI81 207 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 SLC18B1Q6NT16 456 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 CFAP77Q6ZQR2 320 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 FITM2Q8N6M3 262 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 ZNF283Q8N7M2 679 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 SDR9C7Q8NEX9 313 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 OR2Z1Q8NG97 314 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 OR4K13Q8NH42 304 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 GNPDA2Q8TDQ7 276 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 APOBEC3DQ96AK3 386 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 GAL3ST1Q99999 423 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 BTBD10Q9BSF8 475 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 FN3KQ9H479 309 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 EGLN3Q9H6Z9 239 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 RPRD1BQ9NQG5 326 aaKnown RBP8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 DCAF16Q9NXF7 216 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 PTTG3PQ9NZH4 202 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 IL19Q9UHD0 177 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 CDH10Q9Y6N8 788 aa8.84□□□□□ -0.99
HMGXB3-205ENST00000514469 A0A0G2JMP0 313 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 A0A0X1KG70 313 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 ISPDA4D126 451 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 OR6C68A6NDL8 312 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 BHLHE40O14503 412 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 KRT36O76013 467 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 TNFRSF1AP19438 455 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 NOS3P29474 1203 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 CENPAP49450 140 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.83□□□□□ -1
HMGXB3-205ENST00000514469 HLXQ14774 488 aaPredicted RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 RSPO1Q2MKA7 263 aaPredicted RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 LIPNQ5VXI9 398 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 ZNF770Q6IQ21 691 aaPredicted RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 LCN8Q6JVE9 175 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 RPL13AP3Q6NVV1 102 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 FAHD2BQ6P2I3 314 aaPredicted RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 SHQ1Q6PI26 577 aaKnown RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 CORO6Q6QEF8 472 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 CYP2R1Q6VVX0 501 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 COLCA1Q6ZS62 124 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 C1orf229Q6ZS94 237 aaPredicted RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 PEG10Q86TG7 708 aaKnown RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 ARHGAP24Q8N264 748 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 LINC00471Q8N535 108 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 TEX29Q8N6K0 151 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 SEMA6DQ8NFY4 1073 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 OR4M2Q8NGB6 313 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 OR9Q2Q8NGE9 314 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 OR4C15Q8NGM1 316 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 ITLN1Q8WWA0 313 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 PTP4A1Q93096 173 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 FAHD2AQ96GK7 314 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 SIGLEC11Q96RL6 698 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 TMPRSS13Q9BYE2 586 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 PLA2G12AQ9BZM1 189 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 TRIM15Q9C019 465 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 MUC13Q9H3R2 512 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 MAGIXQ9H6Y5 334 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 METTL17Q9H7H0 456 aaPredicted RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 SRA1Q9HD15 236 aaKnown RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 PNRC2Q9NPJ4 139 aaKnown RBP8.83□□□□□ -1
HMGXB3-205ENST00000514469 TMEM106BQ9NUM4 274 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 CYB5R1Q9UHQ9 305 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 METRNQ9UJH8 293 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 NPTNQ9Y639 398 aa8.83□□□□□ -1
HMGXB3-205ENST00000514469 A0A1B0GWJ7 208 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 J3QLI3 93 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 TNFRSF11BO00300 401 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 SURF4O15260 269 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 AVPP01185 164 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 GATA3P23771 443 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 GGT2P36268 569 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 RBMXP38159 391 aaKnown RBP8.82□□□□□ -1
HMGXB3-205ENST00000514469 TRAP1Q12931 704 aaKnown RBP8.82□□□□□ -1
HMGXB3-205ENST00000514469 ECH1Q13011 328 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 SCGB2A2Q13296 93 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 SLC36A3Q495N2 470 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 TMEM155Q4W5P6 130 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 CLEC12AQ5QGZ9 265 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 C1QL2Q7Z5L3 287 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 LINC00346Q8IVM7 164 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 OR5AS1Q8N127 324 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 OR8G5Q8NG78 346 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 OR10AD1Q8NGE0 317 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 OR52L1Q8NGH7 329 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 OR52E2Q8NGJ4 325 aa8.82□□□□□ -1
HMGXB3-205ENST00000514469 OR5L1Q8NGL2 311 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms