RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 COL8A2P25067 703 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 PYCR1P32322 319 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 LIPAP38571 399 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 MAGEB1P43366 347 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 HTR5AP47898 357 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 RGS6P49758 472 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 TMEM33P57088 247 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 SELENOVP59797 346 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 ECH1Q13011 328 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 PCGF3Q3KNV8 242 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 ALKBH6Q3KRA9 238 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 CORO6Q6QEF8 472 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 ARL9Q6T311 187 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 LYPD4Q6UWN0 246 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 FBXW12Q6X9E4 464 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 PARP8Q8N3A8 854 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 ZNF540Q8NDQ6 660 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 ABHD4Q8TB40 342 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 GTF3AQ92664 365 aaKnown RBP8.27□□□□□ -1.09
RNF4-221ENST00000513643 RDH5Q92781 318 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 YIPF5Q969M3 257 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 HCAR1Q9BXC0 346 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 BPESC1Q9GZL8 116 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 OR51B6Q9H340 312 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 TPK1Q9H3S4 243 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 RERGLQ9H628 205 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 SLC25A19Q9HC21 320 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
RNF4-221ENST00000513643 GPR160Q9UJ42 338 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 MALRD1Q5VYJ5 2156 aa8.27□□□□□ -1.09
RNF4-221ENST00000513643 FBN1P35555 2871 aaKnown RBP8.26□□□□□ -1.09
RNF4-221ENST00000513643 ZSCAN5BA6NJL1 495 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 LYNX1G3V0Z9 82 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 GNGT2O14610 69 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 SURF4O15260 269 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 TLX2O43763 284 aaPredicted RBP8.26□□□□□ -1.09
RNF4-221ENST00000513643 DEAF1O75398 565 aaPredicted RBP8.26□□□□□ -1.09
RNF4-221ENST00000513643 TIPRLO75663 272 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 ABHD16AO95870 558 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 IGHV1-46P01743 117 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 ERCC1P07992 297 aaPredicted RBP8.26□□□□□ -1.09
RNF4-221ENST00000513643 ACSM4P0C7M7 580 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 IGHV4-31P0DP07 118 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 LYNX1P0DP58 116 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 CLUP10909 449 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 RAC2P15153 192 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 ZNF23P17027 643 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 ACHEP22303 614 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 CRYBB2P43320 205 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 CENPAP49450 140 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 DAPP51397 102 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 ARHGDIAP52565 204 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 BLVRAP53004 296 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 CDK5R2Q13319 367 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 GINS1Q14691 196 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 FAM209AQ5JX71 171 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 SPATA46Q5T0L3 261 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 SLC27A4Q6P1M0 643 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 Q6ZR03 302 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 Q71RC1 249 aaPredicted RBP8.26□□□□□ -1.09
RNF4-221ENST00000513643 RHOUQ7L0Q8 258 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 LINC00346Q8IVM7 164 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 TIGD4Q8IY51 512 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 IQCF1Q8N6M8 205 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 ZNF511Q8NB15 262 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 OR9Q1Q8NGQ5 310 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 ST7LQ8TDW4 575 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 DNAJC9Q8WXX5 260 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 COG8Q96MW5 612 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 PIMREGQ9BSJ6 248 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 GABARAPL1Q9H0R8 117 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 WDR76Q9H967 626 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 CHODLQ9H9P2 273 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 CYSLTR2Q9NS75 346 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 TMEM160Q9NX00 188 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 AP4S1Q9Y587 144 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 COMMD3-BMI1R4GMX3 469 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 COL6A5A8TX70 2615 aa8.26□□□□□ -1.09
RNF4-221ENST00000513643 A0A1W2PPW3 197 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 TVP23AA6NH52 213 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 E9PQ18 207 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 IFNGP01579 166 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 HMGN1P05114 100 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 SLC2A5P22732 501 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 ANOS1P23352 680 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 GCH1P30793 250 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 FMO3P31513 532 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 ERFP50548 548 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 ZNF81P51508 661 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 ACTR3P61158 418 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 NKPD1Q17RQ9 610 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 C6orf52Q5T4I8 152 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 KDM4DQ6B0I6 523 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 NAA40Q86UY6 237 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 PROKR2Q8NFJ6 384 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 OR51L1Q8NGJ5 315 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 OR5K1Q8NHB7 308 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 TEX47Q8TBZ9 253 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 HPS1Q92902 700 aa8.25□□□□□ -1.09
RNF4-221ENST00000513643 APOBEC3DQ96AK3 386 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms