RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 H2AFXP16104 143 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 SDHAP31040 664 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 CD80P33681 288 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 KRR1Q13601 381 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 GPR139Q6DWJ6 353 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 SLC27A4Q6P1M0 643 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 SHISA2Q6UWI4 295 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 CYP4Z1Q86W10 505 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 MUC20Q8N307 709 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 OR5L1Q8NGL2 311 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 OR13G1Q8NGZ3 307 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 SLC7A13Q8TCU3 470 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 MS4A7Q9GZW8 240 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 NUAK2Q9H093 628 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 ANKRD19PQ9H560 264 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 TMEM165Q9HC07 324 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 NRIP3Q9NQ35 241 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 VSX1Q9NZR4 365 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 IL20RAQ9UHF4 553 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 IER3IP1Q9Y5U9 82 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
POLR2J3-217ENST00000513438 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 IFNL4K9M1U5 179 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 SLC22A2O15244 555 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 GPANK1O95872 356 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 CYB5R3P00387 301 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 COX4I1P13073 169 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 CDKN2AP42771 156 aaKnown RBP11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 CENPAP49450 140 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 RGS6P49758 472 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 GSK3BP49841 420 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 MMP16P51512 607 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 SLC7A2P52569 658 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 KCNMB1Q16558 191 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 PRR31Q5SQ13 230 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 FBXW12Q6X9E4 464 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 PTCHD4Q6ZW05 846 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 JAZF1Q86VZ6 243 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 OR10AD1Q8NGE0 317 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 OR52E2Q8NGJ4 325 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 FAM162AQ96A26 154 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 MEGF10Q96KG7 1140 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 ZNF582Q96NG8 517 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 HOPXQ9BPY8 73 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 OR5V1Q9UGF6 321 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 SOX21Q9Y651 276 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-217ENST00000513438 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 J3QW42 95 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 H1F0P07305 194 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 IGHV4-38-2P0DP08 117 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 NCK1P16333 377 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 OMPP47874 163 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 SRP9P49458 86 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 FXYD6P3P58550 94 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 HIST1H3AP68431 136 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 PAX2Q02962 417 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 MEP1BQ16820 701 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 RSPO1Q2MKA7 263 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 FGD3Q5JSP0 725 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 HIST2H3PS2Q5TEC6 136 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 HIST2H3AQ71DI3 136 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 KLBQ86Z14 1044 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 GJC3Q8NFK1 279 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 RAB40AQ8WXH6 277 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 APOBEC3DQ96AK3 386 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 RSRC1Q96IZ7 334 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 TSSK2Q96PF2 358 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 TMEM246Q9BRR3 403 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 SSBP3Q9BWW4 388 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 ZNF696Q9H7X3 374 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 ZMAT3Q9HA38 289 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 SRA1Q9HD15 236 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 MIOXQ9UGB7 285 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 ATPIF1Q9UII2 106 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 AURKCQ9UQB9 309 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 POLR1DQ9Y2S0 133 aa11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 FAM32AQ9Y421 112 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-217ENST00000513438 A0A1W2PRQ8 180 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 F5H5P2 479 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 DCTN6O00399 190 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 MLNRO43193 412 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 TXNDC12O95881 172 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 RNASE1P07998 156 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 CPT2P23786 658 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 PMELP40967 661 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 RPS6KA3P51812 740 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 GNB2P62879 340 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 DEFA6Q01524 100 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 DGCR6Q14129 220 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 SLC9A3R2Q15599 337 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 FAM201AQ5SY85 155 aa11.2□□□□□ -0.62
POLR2J3-217ENST00000513438 C8orf82Q6P1X6 216 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms