RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LRR1Q96L50 414 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 MAGEB18Q96M61 343 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 SDF2Q99470 211 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 BAG1Q99933 345 aaPredicted RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 CHCHD6Q9BRQ6 235 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 FUZQ9BT04 418 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CENPOQ9BU64 300 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 SLC19A3Q9BZV2 496 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 PAIP1Q9H074 479 aaKnown RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 LRMDAQ9H2I8 198 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 ACOXLQ9NUZ1 547 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 MSRB1Q9NZV6 116 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CPSF2Q9P2I0 782 aaKnown RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF225Q9UK10 706 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 FAF1Q9UNN5 650 aaPredicted RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 STK38LQ9Y2H1 464 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CAB39Q9Y376 341 aaPredicted RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 JRKLQ9Y4A0 524 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 SOX21Q9Y651 276 aaPredicted RBP3□□□□□ -1.93
PDLIM5-218ENST00000513341 DNAH7Q8WXX0 4024 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 TANC2Q9HCD6 1990 aa3□□□□□ -1.93
PDLIM5-218ENST00000513341 CSMD3Q7Z407 3707 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 A0A096LPI6 279 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TMED7-TICAM2A0A0A6YYA0 188 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TRAV40A0A0B4J280 105 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 A0A0B4J293 547 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CENPVL3A0A0U1RRI6 287 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 MDFIC2A0A1B0GVS7 189 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TCRBV9S1A1TA0A576 114 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 A8MVM7 634 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TEX22C9J3V5 150 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 H0YL77 283 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 H3BQF6 201 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 EIF3HO15372 352 aaKnown RBP eCLIP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 UGT2B17O75795 530 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 OR4F21O95013 312 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 AKR7A3O95154 331 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TGDSO95455 350 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 RAB36O95755 333 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 IL1AP01583 271 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 HLA-HP01893 362 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TFPTP0C1Z6 253 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 UBTFL6P0CB48 400 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 UQCRBP14927 111 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF43P17038 809 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TUBG1P23258 451 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CXCR1P25024 350 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 HMOX2P30519 316 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 SSTR1P30872 391 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ANP32AP39687 249 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 MDH2P40926 338 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 IDH2P48735 452 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CCT3P49368 545 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 MMP15P51511 669 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 P2RY4P51582 365 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CDH13P55290 713 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 PKNOX1P55347 436 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 NAA20P61599 178 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 RPP30P78346 268 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 EGFEM1PQ0D2K5 195 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 HSPB3Q12988 150 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 NAB1Q13506 487 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CEACAM7Q14002 265 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 LASP1Q14847 261 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TSTQ16762 297 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 KCTD19Q17RG1 926 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CEACAM16Q2WEN9 425 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ARHGAP11BQ3KRB8 267 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF718Q3SXZ3 478 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ENTPD8Q5MY95 495 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 PDZK1Q5T2W1 519 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 DHRS7BQ6IAN0 325 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 NOXRED1Q6NXP6 359 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 BRD3OSQ6XYD6 125 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 H1FNTQ75WM6 255 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 RRM2BQ7LG56 351 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 PRSS45Q7RTY3 260 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 PIWIL3Q7Z3Z3 882 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CMC1Q7Z7K0 106 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 SERPINA11Q86U17 422 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 RNF130Q86XS8 419 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF283Q8N7M2 679 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 C11orf65Q8NCR3 313 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 DNAAF1Q8NEP3 725 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 OR5R1Q8NH85 324 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 VANGL1Q8TAA9 524 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ACTRT1Q8TDG2 376 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CDS1Q92903 461 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM120BQ96EK7 910 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 CHMP6Q96FZ7 201 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 SAMD8Q96LT4 415 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 C3orf30Q96M34 536 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ALKBH3Q96Q83 286 aaPredicted RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TBX15Q96SF7 602 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF382Q96SR6 550 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 MRPL57Q9BQC6 102 aaKnown RBP2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 TAPBPLQ9BX59 468 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 ACPTQ9BZG2 426 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 GPR61Q9BZJ8 451 aa2.99□□□□□ -1.93
PDLIM5-218ENST00000513341 OR11A1Q9GZK7 315 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms