RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 SLC16A6O15403 523 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 HPGDSO60760 199 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 GASTP01350 101 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 NPY4RP50391 375 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 TMEM267Q0VDI3 215 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 FUT7Q11130 342 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 ZNF658BQ4V348 819 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 SLC23A3Q6PIS1 610 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 B3GLCTQ6Y288 498 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 MAFIPQ8WZ33 124 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 SLC35B4Q969S0 331 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 PKMYT1Q99640 499 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 ZNF696Q9H7X3 374 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 FBXO34Q9NWN3 711 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 EMCNQ9ULC0 261 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 SERTM1A2A2V5 107 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 NCBP2LA6PVI3 153 aaKnown RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 AHRRA9YTQ3 701 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 PPP6CO00743 305 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 TBX19O60806 448 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 HOXA4Q00056 320 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 TBCEQ15813 527 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 ZNF528Q3MIS6 628 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 PAQR6Q6TCH4 344 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 C17orf107Q6ZR85 190 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 MDGA2Q7Z553 956 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 CD163Q86VB7 1156 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 KDM8Q8N371 416 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 ZNF511Q8NB15 262 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 OR2A5Q96R48 311 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 MS4A7Q9GZW8 240 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 MMP25Q9NPA2 562 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 ACKR4Q9NPB9 350 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 DIMT1Q9UNQ2 313 aaKnown RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 IGHV3-15A0A0B4J1V0 119 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 J3KTA2 159 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 NKX2-2O95096 273 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 TPT1P13693 172 aaKnown RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 CSRP1P21291 193 aaKnown RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 KIR2DL1P43626 348 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 GABRA4P48169 554 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 RAB7AP51149 207 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 RPL18Q07020 188 aaKnown RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 LIPNQ5VXI9 398 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 LCN10Q6JVE6 187 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 CIB3Q96Q77 187 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 C1QTNF3Q9BXJ4 246 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 LIN7CQ9NUP9 197 aaKnown RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 GABRPO00591 440 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 LYRM1O43325 122 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 AQP8O94778 261 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 PAPLNO95428 1278 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 NUDT7P0C024 238 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 CT45A10P0DMU9 189 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 CCL4P13236 92 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 GPR6P46095 362 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 MCCD1P59942 119 aaPredicted RBP3.84□□□□□ -1.79
VCAN-209ENST00000513016 PHC1P78364 1004 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 S100A12P80511 92 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 DCAF10Q5QP82 559 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 MRGPREQ86SM8 312 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 SLC30A7Q8NEW0 376 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 OR10D3Q8NH80 312 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 OLIG1Q8TAK6 271 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 ARL11Q969Q4 196 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 SPSB1Q96BD6 273 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 TMEM56Q96MV1 263 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.84□□□□□ -1.79
VCAN-209ENST00000513016 HSPB11Q9Y547 144 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 R4GMQ9 66 aa3.84□□□□□ -1.79
VCAN-209ENST00000513016 ARPC3O15145 178 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 HOXB5P09067 269 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 OR4A8P0C604 315 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 PIPP12273 146 aaPredicted RBP3.84□□□□□ -1.8
VCAN-209ENST00000513016 DRD3P35462 400 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 DIO1P49895 249 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 RAC3P60763 192 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 DHODHQ02127 395 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 PEA15Q15121 130 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 TMEM81Q6P7N7 255 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 CNIH2Q6PI25 160 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 LACC1Q8IV20 430 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 TMEM99Q8N816 258 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 OR5T1Q8NG75 326 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 OR5D18Q8NGL1 313 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 OR6K3Q8NGY3 331 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 PP6455Q8WZ26 134 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 COX14Q96I36 57 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 CMC2Q9NRP2 79 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 SERGEFQ9UGK8 458 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 RPH3ALQ9UNE2 315 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 A0A0A6YYD5 115 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 TCRBV3S1A0A5B6 114 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 XKRY2A2RUG3 117 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 PATE3B3GLJ2 98 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 F2RL2O00254 374 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 UPK1AO00322 258 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 SULT1C2O00338 296 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 DNPH1O43598 174 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms