RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 TMEM69Q5SWH9 247 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 ZNF684Q5T5D7 378 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 TMEM225Q6GV28 225 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 IGFL3Q6UXB1 125 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 LINGO2Q7L985 606 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 KRT74Q7RTS7 529 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 GLB1L2Q8IW92 636 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 NKAIN3Q8N8D7 197 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 OR4M1Q8NGD0 313 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 OR2Y1Q8NGV0 311 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 OR52N5Q8NH56 324 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 ELP5Q8TE02 316 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 RNF128Q8TEB7 428 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 RNF138Q8WVD3 245 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 FCAMRQ8WWV6 532 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 RASL10BQ96S79 203 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 PDCD1LG2Q9BQ51 273 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 TTTY10Q9BZA0 68 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 ABCG5Q9H222 651 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 AKIRIN1Q9H9L7 192 aaPredicted RBP8.46□□□□□ -1.06
MSH3-203ENST00000512531 ELOVL3Q9HB03 270 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 SLC17A5Q9NRA2 495 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 HPF1Q9NWY4 346 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 GFOD1Q9NXC2 390 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 MED11Q9P086 117 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 ABI3Q9P2A4 366 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 MRM2Q9UI43 246 aaKnown RBP8.46□□□□□ -1.06
MSH3-203ENST00000512531 DKKL1Q9UK85 242 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 TCFL5Q9UL49 500 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 HHLA2Q9UM44 414 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 GTF2A1LQ9UNN4 478 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 VDAC3Q9Y277 283 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 POLR1DQ9Y2S0 133 aa8.46□□□□□ -1.06
MSH3-203ENST00000512531 TNRC6AQ8NDV7 1962 aaKnown RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 IGHV1-45A0A0A0MS14 117 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 A0A0G2JMP0 313 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 A0A0X1KG70 313 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 LIPT2A6NK58 231 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 B4DXG7 233 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 FTCDNL1E5RQL4 147 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 F8W735 103 aaPredicted RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 INMT-MINDY4F8WBC2 141 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 GABARAPH6UMI1 98 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 H7C1C5 153 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 ACOT7O00154 380 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 EEF1E1O43324 174 aaKnown RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 UPK3AO75631 287 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 KRT33AO76009 404 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 APOC1P02654 83 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 EIF4EP06730 217 aaKnown RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 H2BFMP0C1H6 154 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 IFNGR1P15260 489 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 ZNF17P17021 662 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 ACHEP22303 614 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 THBS2P35442 1172 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 MNDAP41218 407 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 DSCR4P56555 118 aaPredicted RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 SOX8P57073 446 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 OR10A3P58181 314 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 RPS18P62269 152 aaKnown RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 LCN6P62502 163 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 SSBP1Q04837 148 aaKnown RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 FOXF1Q12946 379 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 INSL4Q14641 139 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 TAF13Q15543 124 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 PLPPR5Q32ZL2 321 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 HIST2H2BCQ6DN03 193 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 FAM199XQ6PEV8 388 aaPredicted RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 SHISA2Q6UWI4 295 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 STAC2Q6ZMT1 411 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 RHOUQ7L0Q8 258 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 LUZP2Q86TE4 346 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 PLCZ1Q86YW0 608 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 RBMXL3Q8N7X1 1067 aaKnown RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 CCDC54Q8NEL0 328 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 FDCSPQ8NFU4 85 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 OR2M3Q8NG83 312 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 OR4M2Q8NGB6 313 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 ZPLD1Q8TCW7 415 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 RNF141Q8WVD5 230 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 AKAP1Q92667 903 aaKnown RBP eCLIP8.45□□□□□ -1.06
MSH3-203ENST00000512531 TMEM106AQ96A25 262 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 C4orf45Q96LM5 186 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 OXGR1Q96P68 337 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 DCLRE1CQ96SD1 692 aaKnown RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 WDR77Q9BQA1 342 aaPredicted RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 MARVELD1Q9BSK0 173 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 C1orf198Q9H425 327 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 STEAP1Q9UHE8 339 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 SLC5A6Q9Y289 635 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 MRPS7Q9Y2R9 242 aaKnown RBP8.45□□□□□ -1.06
MSH3-203ENST00000512531 R4GMQ9 66 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 CELSR2Q9HCU4 2923 aa8.45□□□□□ -1.06
MSH3-203ENST00000512531 A0A0A6YYH2 397 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 IGLV1-36A0A0B4J1U3 117 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 A0A0G2JK05 382 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 LOC102725191A0A1B0GVB3 256 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 A0A1W2PPK0 400 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 SHISA3A0PJX4 238 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms