RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 RENP00797 406 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 AVPP01185 164 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 GASTP01350 101 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 IGHV2-5P01817 119 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 PCMT1P22061 227 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 MAGEA2P43356 314 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 COX10Q12887 443 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 KRTAP27-1Q3LI81 207 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 ZNF362Q5T0B9 420 aaPredicted RBP15.17■□□□□ 0.02
TPM3-220ENST00000509601 PGM2L1Q6PCE3 622 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 DNM1P34Q6PK57 102 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 ZNF620Q6ZNG0 422 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 RINLQ6ZS11 566 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 C1orf229Q6ZS94 237 aaPredicted RBP15.17■□□□□ 0.02
TPM3-220ENST00000509601 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.17■□□□□ 0.02
TPM3-220ENST00000509601 JAZF1Q86VZ6 243 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 OR51F2Q8NH61 342 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 COG8Q96MW5 612 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 COQ7Q99807 217 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 BTBD10Q9BSF8 475 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 TRIM15Q9C019 465 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 EGLN3Q9H6Z9 239 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 RPRD1BQ9NQG5 326 aaKnown RBP15.17■□□□□ 0.02
TPM3-220ENST00000509601 G6PC2Q9NQR9 355 aa15.17■□□□□ 0.02
TPM3-220ENST00000509601 TRAV20A0A0B4J274 112 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 TNFRSF11BO00300 401 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 ANPEPP15144 967 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 RAC2P15153 192 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 GGT2P36268 569 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 TNFAIP6P98066 277 aaPredicted RBP15.16■□□□□ 0.02
TPM3-220ENST00000509601 PPP1R8Q12972 351 aaKnown RBP15.16■□□□□ 0.02
TPM3-220ENST00000509601 HLXQ14774 488 aaPredicted RBP15.16■□□□□ 0.02
TPM3-220ENST00000509601 SLC35F1Q5T1Q4 408 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 SLC18B1Q6NT16 456 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 FBXW12Q6X9E4 464 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 SDR9C7Q8NEX9 313 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 OR9Q2Q8NGE9 314 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 OR52E2Q8NGJ4 325 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 ZNRF4Q8WWF5 429 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 TIMD4Q96H15 378 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 FN3KQ9H479 309 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 MRPL22Q9NWU5 206 aaKnown RBP15.16■□□□□ 0.02
TPM3-220ENST00000509601 IL20Q9NYY1 176 aa15.16■□□□□ 0.02
TPM3-220ENST00000509601 J3QW42 95 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 BHLHE40O14503 412 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 RGS6P49758 472 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.15■□□□□ 0.02
TPM3-220ENST00000509601 SLC3A1Q07837 685 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 TRIM25Q14258 630 aaKnown RBP15.15■□□□□ 0.02
TPM3-220ENST00000509601 ZMAT1Q5H9K5 638 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 CLEC12AQ5QGZ9 265 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 LCN8Q6JVE9 175 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 FAHD2BQ6P2I3 314 aaPredicted RBP15.15■□□□□ 0.02
TPM3-220ENST00000509601 COLCA1Q6ZS62 124 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 LINC00346Q8IVM7 164 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 ARHGAP24Q8N264 748 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 RFLNBQ8N5W9 214 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 OR2Z1Q8NG97 314 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 FAHD2AQ96GK7 314 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 PLA2G12AQ9BZM1 189 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 PNRC2Q9NPJ4 139 aaKnown RBP15.15■□□□□ 0.02
TPM3-220ENST00000509601 PTTG3PQ9NZH4 202 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 CYB5R1Q9UHQ9 305 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 POLR1DQ9Y2S0 133 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 CDH10Q9Y6N8 788 aa15.15■□□□□ 0.02
TPM3-220ENST00000509601 NOS3P29474 1203 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 OR2T2Q6IF00 324 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 CFAP77Q6ZQR2 320 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 RASSF6Q6ZTQ3 369 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 NAA40Q86UY6 237 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 DHFR2Q86XF0 187 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 LINC00471Q8N535 108 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 ZNF283Q8N7M2 679 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 OR5L1Q8NGL2 311 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 OR8D4Q8NGM9 314 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 ITLN1Q8WWA0 313 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 APOBEC3DQ96AK3 386 aaPredicted RBP15.14■□□□□ 0.01
TPM3-220ENST00000509601 RAB39BQ96DA2 213 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 C19orf24Q9BVV8 132 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 C1QTNF5Q9BXJ0 243 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 HDHD2Q9H0R4 259 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 MAGIXQ9H6Y5 334 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 TMEM106BQ9NUM4 274 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 VNN3Q9NY84 501 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 IL19Q9UHD0 177 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 METRNQ9UJH8 293 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 NPTNQ9Y639 398 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 TANC2Q9HCD6 1990 aa15.14■□□□□ 0.01
TPM3-220ENST00000509601 FAM107AO95990 144 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 IGHV2-70P01814 119 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 SLC36A3Q495N2 470 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 LIPNQ5VXI9 398 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 OR5AS1Q8N127 324 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 OR8G5Q8NG78 346 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 SIGLEC11Q96RL6 698 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 CDADC1Q9BWV3 514 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 TMPRSS13Q9BYE2 586 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 METTL17Q9H7H0 456 aaPredicted RBP15.13■□□□□ 0.01
TPM3-220ENST00000509601 TAS2R1Q9NYW7 299 aa15.13■□□□□ 0.01
TPM3-220ENST00000509601 FBN3Q75N90 2809 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms