RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 MELKQ14680 651 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 GINS1Q14691 196 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 PTGES3Q15185 160 aaKnown RBP4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 PGGHGQ32M88 737 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 TSPO2Q5TGU0 170 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 TTC23Q5W5X9 447 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 ZNF474Q6S9Z5 364 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 PLXDC2Q6UX71 529 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 UBE2J2Q8N2K1 259 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 ZNF555Q8NEP9 628 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 MCHR2Q969V1 340 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 PLEKHA8Q96JA3 519 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 Q96M85 177 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 MUS81Q96NY9 551 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 TSPAN32Q96QS1 320 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 RBM24Q9BX46 236 aaKnown RBP4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 ULBP2Q9BZM5 246 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 PRDM13Q9H4Q3 707 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 EGLN3Q9H6Z9 239 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 CMC2Q9NRP2 79 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC7A10Q9NS82 523 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 SMPD3Q9NY59 655 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 NDRG3Q9UGV2 375 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 MOKQ9UQ07 419 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 MAGED1Q9Y5V3 778 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 FKBP7Q9Y680 259 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 RTTNQ86VV8 2226 aa4.8□□□□□ -1.64
HMGB1P44-201ENST00000508597 CADP27708 2225 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 ARPC4-TTLL3A0A0A6YYG9 625 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 CIB4A0PJX0 185 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SNTNA6NMZ2 147 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 E9PQ18 207 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 H0YAE9 185 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SOCS2O14508 198 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SURF4O15260 269 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 KHDRBS3O75525 346 aaKnown RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 UPK3AO75631 287 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SERPINI2O75830 405 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 FARS2O95363 451 aaKnown RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SOX14O95416 240 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 ATP6V1G2O95670 118 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 PPP1R3DO95685 299 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 QDPRP09417 244 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR8G3PP0DMU2 310 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 HIST1H1CP16403 213 aaKnown RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 IGHV1-2P23083 117 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 IL32P24001 234 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 UGT2B10P36537 528 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 CDKN2AP42771 156 aaKnown RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 HSPA13P48723 471 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 PTH2RP49190 550 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 CDC42P60953 191 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 MRPS34P82930 218 aaKnown RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 ROR2Q01974 943 aaKnown RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 GLO1Q04760 184 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 TFF3Q07654 80 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 LGALS3BPQ08380 585 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 CD47Q08722 323 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 TMED1Q13445 227 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 KEAP1Q14145 624 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SNAPC1Q16533 368 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 CEACAM16Q2WEN9 425 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 MESTQ5EB52 335 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC35D3Q5M8T2 416 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 CLEC12AQ5QGZ9 265 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 TIMM23BQ5SRD1 257 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC25A30Q5SVS4 291 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLX4IPQ5VYV7 408 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 C12orf73Q69YU5 71 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 ACSM5Q6NUN0 579 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 ANKRD16Q6P6B7 361 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC25A47Q6Q0C1 308 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 STAC2Q6ZMT1 411 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 FOXL2NBQ6ZUU3 175 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 LUZP2Q86TE4 346 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 IGFN1Q86VF2 1251 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 MEX3DQ86XN8 651 aaKnown RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 DHRSXQ8N5I4 330 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 ZNF433Q8N7K0 673 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 NPEPL1Q8NDH3 523 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SETD9Q8NE22 299 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR52E2Q8NGJ4 325 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR8D4Q8NGM9 314 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR8J1Q8NGP2 316 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR2T4Q8NH00 348 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 OR4Q3Q8NH05 313 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 HSD17B8Q92506 261 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 HDAC2Q92769 488 aaKnown RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 MUCL1Q96DR8 90 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 DACH2Q96NX9 599 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 DDOQ99489 341 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC29A1Q99808 456 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 APOL4Q9BPW4 351 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 EMC6Q9BV81 110 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 PLA2G12AQ9BZM1 189 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 RACGAP1Q9H0H5 632 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 OPN3Q9H1Y3 402 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 SLC25A32Q9H2D1 315 aa4.79□□□□□ -1.64
HMGB1P44-201ENST00000508597 KCNN2Q9H2S1 579 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms