RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 TIMP4Q99727 224 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 EMC6Q9BV81 110 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 TMEM59Q9BXS4 323 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 C9orf170A2RU37 121 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 OIP5O43482 229 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 SLC6A8P48029 635 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 RPL27P61353 136 aaKnown RBP13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 PPP1CAP62136 330 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 Q6ZRG5 221 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 BAHD1Q8TBE0 780 aaPredicted RBP13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 NUDT9Q9BW91 350 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 TRAV36DV7A0A075B6V5 113 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 RHPN2P1A8MT19 583 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 HCRTR1O43613 425 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 NME2P1O60361 137 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 TIMP1P01033 207 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 GLIPR1L1Q6UWM5 242 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 LDLRAD3Q86YD5 345 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 SLC22A24Q8N4F4 322 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 HSD17B11Q8NBQ5 300 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 CLEC1AQ8NC01 280 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 TMEM234Q8WY98 164 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 SLC25A28Q96A46 364 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 FBXO17Q96EF6 278 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 SEMA6CQ9H3T2 930 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 MED9Q9NWA0 146 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 TNFSF18Q9UNG2 199 aa13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 MRPS28Q9Y2Q9 187 aaKnown RBP13.21□□□□□ -0.29
ATP2C1-214ENST00000508532 OR6C65A6NJZ3 312 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 NAT2P11245 290 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 SLC25A1P53007 311 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 FZD5Q13467 585 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 SGPP2Q8IWX5 399 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 ZNF595Q8IYB9 648 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 AMELYQ99218 206 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 NXF5Q9H1B4 397 aaKnown RBP13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 UQCC1Q9NVA1 299 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 PLXND1Q9Y4D7 1925 aa13.21□□□□□ -0.3
ATP2C1-214ENST00000508532 MPZL1O95297 269 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 IGKV1D-16P01601 117 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SFTA3P0C7M3 94 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SERPINA2P20848 420 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SERTAD2Q14140 314 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SPIN3Q5JUX0 258 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 CHRDL2Q6WN34 429 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 TAAR8Q969N4 342 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 PGAM5Q96HS1 289 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 TLNRD1Q9H1K6 362 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 EXOSC3Q9NQT5 275 aaKnown RBP13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 BPTFQ12830 3046 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 TMED7-TICAM2A0A0A6YYA0 188 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 RAB19A4D1S5 217 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 TMEM127O75204 238 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 FABP1P07148 127 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 MPGP29372 298 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 RP1P56715 2156 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 PJVKQ0ZLH3 352 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 RHEBQ15382 184 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SLC36A1Q7Z2H8 476 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 WDSUB1Q8N9V3 476 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 GPX8Q8TED1 209 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SLC19A3Q9BZV2 496 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 CHRDQ9H2X0 955 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 PDE7BQ9NP56 450 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 LRP12Q9Y561 859 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 PRSS37A4D1T9 235 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 FAM189A2Q15884 450 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 ZNF674Q2M3X9 581 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SHEQ5VZ18 495 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SULF2Q8IWU5 870 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 PHYHIPLQ96FC7 376 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 LCORQ96JN0 433 aaPredicted RBP13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 FN3KRPQ9HA64 309 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SPACA1Q9HBV2 294 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 RNASEK-C17orf49H0YIS7 233 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 ZNF354AO60765 605 aaPredicted RBP13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 NSA2O95478 260 aaKnown RBP13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 OR13C7P0DN81 318 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 NQO2P16083 231 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 BLKP51451 505 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 VAMP2P63027 116 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 MESTQ5EB52 335 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 LMX1AQ8TE12 382 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 ASB13Q8WXK3 278 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 MAP3K3Q99759 626 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SDHAF3Q9NRP4 125 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 AUP1Q9Y679 476 aa13.2□□□□□ -0.3
ATP2C1-214ENST00000508532 SCN8AQ9UQD0 1980 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 CCDC163A0A0D9SF12 145 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 OR2T1O43869 369 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 LILRB3O75022 631 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 ADAM11O75078 769 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 SCGNO76038 276 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 GABRR1P24046 479 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 NPBWR1P48145 328 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 CAV2P51636 162 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 PBDC1Q9BVG4 233 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 OR5K4A6NMS3 321 aa13.19□□□□□ -0.3
ATP2C1-214ENST00000508532 UPK3AO75631 287 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms