RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CRLF1O75462 422 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 SOX14O95416 240 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 IGHV4-31P0DP07 118 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 RAC2P15153 192 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 KITLGP21583 273 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 GRK5P34947 590 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 GGT2P36268 569 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 MPV17P39210 176 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 CRYBB2P43320 205 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 GPR6P46095 362 aaPredicted RBP16.96■□□□□ 0.31
SFXN1-209ENST00000508290 MEP1BQ16820 701 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 SLC27A4Q6P1M0 643 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 PTP4A1Q93096 173 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 ELMOD3Q96FG2 381 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 NIPSNAP1Q9BPW8 284 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 SAP30LQ9HAJ7 183 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 ARMC1Q9NVT9 282 aa16.96■□□□□ 0.31
SFXN1-209ENST00000508290 IGHV1-69-2A0A0G2JMI3 117 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 TPD52L2O43399 206 aaKnown RBP16.95■□□□□ 0.3
SFXN1-209ENST00000508290 CD55P08174 381 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 PAICSP22234 425 aaKnown RBP16.95■□□□□ 0.3
SFXN1-209ENST00000508290 TNFSF4P23510 183 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 FMO3P31513 532 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 MAGEB1P43366 347 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 CCL8P80075 99 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 CRMP1Q14194 572 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 ALKBH6Q3KRA9 238 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 TEX30Q5JUR7 227 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.95■□□□□ 0.3
SFXN1-209ENST00000508290 CYB561A3Q8NBI2 242 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 OR4Q3Q8NH05 313 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 SPTSSAQ969W0 71 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 HAVCR1Q96D42 359 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 PITX2Q99697 317 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 NMNAT2Q9BZQ4 307 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 FN3KQ9H479 309 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 LPAR3Q9UBY5 353 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 CDC42EP3Q9UKI2 254 aa16.95■□□□□ 0.3
SFXN1-209ENST00000508290 CR1P17927 2039 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 FN1P02751 2386 aaKnown RBP16.94■□□□□ 0.3
SFXN1-209ENST00000508290 RP2O75695 350 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 GPANK1O95872 356 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 HMGN1P05114 100 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 OSMP13725 252 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 SLC3A1Q07837 685 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 PSG7Q13046 419 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 HFEQ30201 348 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 KRTAP27-1Q3LI81 207 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 FAM166AQ6J272 317 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 SHQ1Q6PI26 577 aaKnown RBP16.94■□□□□ 0.3
SFXN1-209ENST00000508290 FBXW12Q6X9E4 464 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 HIPK1Q86Z02 1210 aa16.94■□□□□ 0.3
SFXN1-209ENST00000508290 MRPL22Q9NWU5 206 aaKnown RBP16.94■□□□□ 0.3
SFXN1-209ENST00000508290 PURGQ9UJV8 347 aaKnown RBP16.94■□□□□ 0.3
SFXN1-209ENST00000508290 SURF4O15260 269 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 LILRA1O75019 489 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 NCR1O76036 304 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 IGHV1-46P01743 117 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 SELEP16581 610 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 SPI1P17947 270 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 TPTEP56180 551 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 PCK2Q16822 640 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 CORO6Q6QEF8 472 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 CFAP77Q6ZQR2 320 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 COLCA1Q6ZS62 124 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 ATG16L2Q8NAA4 619 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 TIMD4Q96H15 378 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 C1QTNF5Q9BXJ0 243 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 ZNF275Q9NSD4 429 aaPredicted RBP16.93■□□□□ 0.3
SFXN1-209ENST00000508290 DDX28Q9NUL7 540 aaKnown RBP16.93■□□□□ 0.3
SFXN1-209ENST00000508290 KCNS2Q9ULS6 477 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 STARD10Q9Y365 291 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 COMMD3-BMI1R4GMX3 469 aa16.93■□□□□ 0.3
SFXN1-209ENST00000508290 ZSCAN5BA6NJL1 495 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 CLDN25C9JDP6 229 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 FCGR1AP12314 374 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 TNFRSF1AP19438 455 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 PCMT1P22061 227 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 COL8A2P25067 703 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 PYCR1P32322 319 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 ENTPD1P49961 510 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 MALLQ13021 153 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 CDK5R2Q13319 367 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 C1orf146Q5VVC0 180 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 LINC00346Q8IVM7 164 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 SLC7A6Q92536 515 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 SLCO4A1Q96BD0 722 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 CMBLQ96DG6 245 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 C1orf159Q96HA4 380 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 HCAR1Q9BXC0 346 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 KIF17Q9P2E2 1029 aa16.92■□□□□ 0.3
SFXN1-209ENST00000508290 LOC100289279A0A1B0GTE1 492 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 LYNX1G3V0Z9 82 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 PPIHO43447 177 aaKnown RBP16.91■□□□□ 0.3
SFXN1-209ENST00000508290 SPRY3O43610 288 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 DBHP09172 617 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 ACSM4P0C7M7 580 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 LYNX1P0DP58 116 aa16.91■□□□□ 0.3
SFXN1-209ENST00000508290 TSTQ16762 297 aaKnown RBP16.91■□□□□ 0.3
SFXN1-209ENST00000508290 CHRFAM7AQ494W8 412 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms