RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FRMD7Q6ZUT3 714 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 RANBP3LQ86VV4 465 aaPredicted RBP5.8□□□□□ -1.48
VCAN-207ENST00000507162 SLC35F6Q8N357 371 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 BHLHE23Q8NDY6 225 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 OR4X2Q8NGF9 303 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 ADAMTS16Q8TE57 1224 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 TNFRSF14Q92956 283 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 EPYCQ99645 322 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 ERP44Q9BS26 406 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 SLC35A5Q9BS91 424 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 ARMC7Q9H6L4 198 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 EDA2RQ9HAV5 297 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 CACYBPQ9HB71 228 aaKnown RBP5.8□□□□□ -1.48
VCAN-207ENST00000507162 TMEM100Q9NV29 134 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 TBCCD1Q9NVR7 557 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 PTTG3PQ9NZH4 202 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 RNF7Q9UBF6 113 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 ZNF443Q9Y2A4 671 aaPredicted RBP5.8□□□□□ -1.48
VCAN-207ENST00000507162 TIMM10BQ9Y5J6 103 aa5.8□□□□□ -1.48
VCAN-207ENST00000507162 IGHV3OR15-7A0A075B7D8 119 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 A0A1B0GWA3 101 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 MLNRO43193 412 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 SLC22A3O75751 556 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 MYL2P10916 166 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 RAC2P15153 192 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 PAICSP22234 425 aaKnown RBP5.79□□□□□ -1.48
VCAN-207ENST00000507162 TUBG1P23258 451 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 FPR3P25089 353 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 PHBP35232 272 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 ECH1Q13011 328 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 AANATQ16613 207 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 C11orf91Q3C1V1 193 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 PDCD4Q53EL6 469 aaKnown RBP5.79□□□□□ -1.48
VCAN-207ENST00000507162 ALG10BQ5I7T1 473 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 CLEC12AQ5QGZ9 265 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 INTS11Q5TA45 600 aaKnown RBP5.79□□□□□ -1.48
VCAN-207ENST00000507162 NCR3LG1Q68D85 454 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 C10orf99Q6UWK7 81 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 ETV3LQ6ZN32 361 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 PIGWQ7Z7B1 504 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 RIMKLAQ8IXN7 391 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 LRRC34Q8IZ02 419 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 CLDN22Q8N7P3 220 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 FNDC5Q8NAU1 212 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 LY6G5BQ8NDX9 201 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 OR5J2Q8NH18 312 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 H1FXQ92522 213 aaKnown RBP5.79□□□□□ -1.48
VCAN-207ENST00000507162 AJUBAQ96IF1 538 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 PPP3R2Q96LZ3 170 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 DUX3Q96PT4 197 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 PAFAH2Q99487 392 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 CCL13Q99616 98 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 RMND5AQ9H871 391 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 SRA1Q9HD15 236 aaKnown RBP5.79□□□□□ -1.48
VCAN-207ENST00000507162 TUBG2Q9NRH3 451 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 SELENONQ9NZV5 590 aa5.79□□□□□ -1.48
VCAN-207ENST00000507162 PRSS51A0A1B0GVH4 220 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 OOEPA6NGQ2 149 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 NUDT19A8MXV4 375 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 RNASET2O00584 256 aaKnown RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 SLC2A10O95528 541 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 SERPINE1P05121 402 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 SNRPAP09012 282 aaKnown RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 FRMD6-AS1P0C7T7 363 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 DUX4L4P0CJ87 422 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 POU1F1P28069 291 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 LAP3P28838 519 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 GUCA1AP43080 201 aaPredicted RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 VEGFCP49767 419 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 LGALS4P56470 323 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 ELF3P78545 371 aaPredicted RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 MRPS34P82930 218 aaKnown RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 MAB21L1Q13394 359 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 IKZF1Q13422 519 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 BLMHQ13867 455 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 NXNQ6DKJ4 435 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 SLC30A8Q8IWU4 369 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 OR6S1Q8NH40 331 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 Q8TCH9 128 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 DNAJA4Q8WW22 397 aaPredicted RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 ERGIC1Q969X5 290 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 CCDC115Q96NT0 180 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 NAPGQ99747 312 aaPredicted RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 ECSITQ9BQ95 431 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 CPPED1Q9BRF8 314 aaPredicted RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 TRIM36Q9NQ86 728 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 ABCB10Q9NRK6 738 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 TAS2R5Q9NYW4 299 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 ZNF256Q9Y2P7 627 aaPredicted RBP5.78□□□□□ -1.48
VCAN-207ENST00000507162 PPP2R2CQ9Y2T4 447 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 DNAJC15Q9Y5T4 150 aa5.78□□□□□ -1.48
VCAN-207ENST00000507162 A0A1W2PQ09 198 aa5.77□□□□□ -1.49
VCAN-207ENST00000507162 A6NDX4 124 aa5.77□□□□□ -1.49
VCAN-207ENST00000507162 TMEM233B4DJY2 109 aa5.77□□□□□ -1.49
VCAN-207ENST00000507162 MCIDASD6RGH6 385 aa5.77□□□□□ -1.49
VCAN-207ENST00000507162 H0YAE9 185 aa5.77□□□□□ -1.49
VCAN-207ENST00000507162 TRMUO75648 421 aaKnown RBP5.77□□□□□ -1.49
VCAN-207ENST00000507162 HIST1H2ABP04908 130 aa5.77□□□□□ -1.49
VCAN-207ENST00000507162 MYCNOSP40205 109 aa5.77□□□□□ -1.49
VCAN-207ENST00000507162 GSK3BP49841 420 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms