RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 PCK2Q16822 640 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 RSPO1Q2MKA7 263 aaPredicted RBP11.6□□□□□ -0.55
PDCD6-204ENST00000506909 CLEC9AQ6UXN8 241 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.6□□□□□ -0.55
PDCD6-204ENST00000506909 ZNF786Q8N393 782 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 PARP8Q8N3A8 854 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 IQCF1Q8N6M8 205 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 UBASH3BQ8TF42 649 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 SNX33Q8WV41 574 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 SLC7A6Q92536 515 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 PTP4A1Q93096 173 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 TPK1Q9H3S4 243 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 SLC25A19Q9HC21 320 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 HINT3Q9NQE9 182 aaKnown RBP11.6□□□□□ -0.55
PDCD6-204ENST00000506909 PAPOLBQ9NRJ5 636 aaKnown RBP11.6□□□□□ -0.55
PDCD6-204ENST00000506909 NKIRAS2Q9NYR9 191 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 GRIP1Q9Y3R0 1128 aa11.6□□□□□ -0.55
PDCD6-204ENST00000506909 DYSFO75923 2080 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 MT-ND5P03915 603 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 GYPBP06028 91 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 DBHP09172 617 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 CLUP10909 449 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 NAT2P11245 290 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 HOXB4P17483 251 aaPredicted RBP11.59□□□□□ -0.55
PDCD6-204ENST00000506909 PAICSP22234 425 aaKnown RBP11.59□□□□□ -0.55
PDCD6-204ENST00000506909 GIFP27352 417 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 LIPAP38571 399 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 MPV17P39210 176 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 CRISP1P54107 249 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 ACTR3P61158 418 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 LOXL1Q08397 574 aaPredicted RBP11.59□□□□□ -0.55
PDCD6-204ENST00000506909 KRTAP27-1Q3LI81 207 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 TEX30Q5JUR7 227 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 SPATA46Q5T0L3 261 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 LINC01590Q5TEZ4 76 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 CFAP77Q6ZQR2 320 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 AMIGO2Q86SJ2 522 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 ZDHHC13Q8IUH4 622 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 LINC00346Q8IVM7 164 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 ZNF540Q8NDQ6 660 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 OR51L1Q8NGJ5 315 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 OR5L1Q8NGL2 311 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 LRTOMTQ8WZ04 291 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 MAP6Q96JE9 813 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 PITX2Q99697 317 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 ATF6BQ99941 703 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 PIMREGQ9BSJ6 248 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
PDCD6-204ENST00000506909 PNRC2Q9NPJ4 139 aaKnown RBP11.59□□□□□ -0.55
PDCD6-204ENST00000506909 KIF17Q9P2E2 1029 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 CGGBP1Q9UFW8 167 aaPredicted RBP11.59□□□□□ -0.55
PDCD6-204ENST00000506909 STARD10Q9Y365 291 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 COMMD3-BMI1R4GMX3 469 aa11.59□□□□□ -0.55
PDCD6-204ENST00000506909 MALRD1Q5VYJ5 2156 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 TVP23AA6NH52 213 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 PRR23D1E9PI22 279 aaPredicted RBP11.58□□□□□ -0.56
PDCD6-204ENST00000506909 SURF4O15260 269 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 GLCEO94923 617 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 HPXP02790 462 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 ADH4P08319 380 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 PRR23D2P0DMB1 279 aaPredicted RBP11.58□□□□□ -0.56
PDCD6-204ENST00000506909 NR4A2P43354 598 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 ENTPD1P49961 510 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 MMP15P51511 669 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 ESRRGP62508 458 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 MRPS11P82912 194 aaKnown RBP11.58□□□□□ -0.56
PDCD6-204ENST00000506909 PCGF3Q3KNV8 242 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 TMEM255AQ5JRV8 349 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 KDM4DQ6B0I6 523 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 TMEM154Q6P9G4 183 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 LYPD4Q6UWN0 246 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 COLCA1Q6ZS62 124 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 MAPK1IP1LQ8NDC0 245 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 APOBEC3DQ96AK3 386 aaPredicted RBP11.58□□□□□ -0.56
PDCD6-204ENST00000506909 CENPNQ96H22 339 aaPredicted RBP11.58□□□□□ -0.56
PDCD6-204ENST00000506909 HCAR1Q9BXC0 346 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 GABARAPL1Q9H0R8 117 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 WDR76Q9H967 626 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 MARCH7Q9H992 704 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 CYSLTR2Q9NS75 346 aa11.58□□□□□ -0.56
PDCD6-204ENST00000506909 NIPBLQ6KC79 2804 aaeCLIP11.58□□□□□ -0.567e-6■□□□□ 10.5
PDCD6-204ENST00000506909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.57□□□□□ -0.563e-9■■■■□ 25.3
PDCD6-204ENST00000506909 PLSCR5A0PG75 271 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 FAM183AA6NL82 134 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 ANKRD65E5RJM6 399 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 ZNF593O00488 134 aaPredicted RBP11.57□□□□□ -0.56
PDCD6-204ENST00000506909 PRODHO43272 600 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 ZNF23P17027 643 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 KITLGP21583 273 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 USF1P22415 310 aaPredicted RBP11.57□□□□□ -0.56
PDCD6-204ENST00000506909 RPS27P42677 84 aaKnown RBP11.57□□□□□ -0.56
PDCD6-204ENST00000506909 KRTAP1-1Q07627 177 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 PSG7Q13046 419 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 PTGES3Q15185 160 aaKnown RBP11.57□□□□□ -0.56
PDCD6-204ENST00000506909 ALKBH6Q3KRA9 238 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 TMEM236Q5W0B7 351 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 FBXW12Q6X9E4 464 aa11.57□□□□□ -0.56
PDCD6-204ENST00000506909 C10orf67Q8IYJ2 551 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms