RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 LOC390937A0A1W2PQ73 354 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 PRAMEF26H0Y7S4 382 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 LRP3O75074 770 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 MED6O75586 246 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 ZNF14P17017 642 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 RAB6AP20340 208 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 C1orf100Q5SVJ3 147 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 AGBL4Q5VU57 503 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 BHLHE23Q8NDY6 225 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 TCTEX1D2Q8WW35 142 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 SLC25A44Q96H78 314 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 VSTM2LQ96N03 204 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 ZDHHC4Q9NPG8 344 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 RPS10P5Q9NQ39 176 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 OR2S2Q9NQN1 319 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 GTF2A1LQ9UNN4 478 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 KPTNQ9Y664 436 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 LTBP2Q14767 1821 aa15.34■□□□□ 0.05
SQSTM1-211ENST00000506690 MEGF11A6BM72 1044 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 ZNF729A6NN14 1252 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 TNFSF14O43557 240 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 SLC35E2P0CK97 266 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 ACKR3P25106 362 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 TAS2R31P59538 309 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 ACTR1AP61163 376 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 MFGE8Q08431 387 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 NPSR1Q6W5P4 371 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 DBX2Q6ZNG2 339 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 SLC35D2Q76EJ3 337 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 ATG4DQ86TL0 474 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 LYPD6Q86Y78 171 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 KDF1Q8NAX2 398 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 OR4C3Q8NH37 302 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 ZNF563Q8TA94 476 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 ASB17Q8WXJ9 295 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 AKR1E2Q96JD6 320 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 OCSTAMPQ9BR26 566 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 LRIT1Q9P2V4 623 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 GDF2Q9UK05 429 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 RHBDD3Q9Y3P4 386 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 PNMTP11086 282 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 CD1CP29017 333 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 SULT1A2P50226 295 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 EGR4Q05215 589 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 HMGN3Q15651 99 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 AKIRIN2Q53H80 203 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 KLHL26Q53HC5 615 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 EIF5AL1Q6IS14 154 aaKnown RBP15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 HOGA1Q86XE5 327 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 CACUL1Q86Y37 369 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 PARP11Q9NR21 331 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 GDE1Q9NZC3 331 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 DMRT1Q9Y5R6 373 aa15.33■□□□□ 0.04
SQSTM1-211ENST00000506690 A6NLC8 198 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 PPIHO43447 177 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 LSSP48449 732 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 ROM1Q03395 351 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 GAB4Q2WGN9 574 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 OTPQ5XKR4 325 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 CATSPERDQ86XM0 798 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 CA13Q8N1Q1 262 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 JAGN1Q8N5M9 183 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 SLC22A18Q96BI1 424 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 PDE7BQ9NP56 450 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 DEC1Q9P2X7 70 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 PCOLCE2Q9UKZ9 415 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 KIAA0100Q14667 2235 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 METTL21EPA6NDL7 271 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 AGPAT2O15120 278 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 EML2O95834 649 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 CSTBP04080 98 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 SERPINA5P05154 406 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 NQO2P16083 231 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 RAB5AP20339 215 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 GLP1RP43220 463 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 EIF5AP63241 154 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 SPOCK1Q08629 439 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 KIF26BQ2KJY2 2108 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 TMEM128Q5BJH2 165 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 WBP2NLQ6ICG8 309 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 TAF8Q7Z7C8 310 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 OR4D6Q8NGJ1 314 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 MARCH1Q8TCQ1 289 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 CMBLQ96DG6 245 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 G6PC3Q9BUM1 346 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 TMPRSS5Q9H3S3 457 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 SRMSQ9H3Y6 488 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 RAB18Q9NP72 206 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 ALPK2Q86TB3 2170 aa15.32■□□□□ 0.04
SQSTM1-211ENST00000506690 OTOL1A6NHN0 477 aaPredicted RBP15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 AP4M1O00189 453 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 OR10H2O60403 315 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 TBPP20226 339 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 NME2P22392 152 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 TGIF1Q15583 401 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 WDSUB1Q8N9V3 476 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 LYPD6BQ8NI32 183 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 NKD1Q969G9 470 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 MALSU1Q96EH3 234 aa15.31■□□□□ 0.04
SQSTM1-211ENST00000506690 SPACA7Q96KW9 195 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms