RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 HEATR9A2RTY3 570 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 GOLGA8OA6NCC3 632 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 OR6C74A6NCV1 312 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 ZNF233A6NK53 670 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 ZNF716A6NP11 495 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 LYRM9A8MSI8 78 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 GOLGA8NF8WBI6 632 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 SMKR1H3BMG3 65 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 SIRPB1O00241 398 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 NDUFAB1O14561 156 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 SCAMP2O15127 329 aaKnown RBP1.4□□□□□ -2.19
GYPB-207ENST00000506679 CLOCKO15516 846 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 FKBP6O75344 327 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 H6PDO95479 791 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 AGTP01019 485 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 KRT14P02533 472 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 IL4P05112 153 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 ANXA5P08758 320 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 ACSM4P0C7M7 580 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 ZNF735P0CB33 412 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 HCAR3P49019 387 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 P2RX1P51575 399 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 PRRX1P54821 245 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 PPP1CBP62140 327 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 CRADDP78560 199 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 KIR2DS1Q14954 304 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 RNASE13Q5GAN3 156 aaKnown RBP1.4□□□□□ -2.19
GYPB-207ENST00000506679 ARMC12Q5T9G4 340 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 RAET1LQ5VY80 246 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 GTPBP8Q8N3Z3 284 aaPredicted RBP1.4□□□□□ -2.19
GYPB-207ENST00000506679 MIR7-3HGQ8N6C7 128 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 ST20-AS1Q8NBB2 130 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 OR4C5Q8NGB2 326 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 RAB3IL1Q8TBN0 382 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 SLC25A46Q96AG3 418 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 MICU1Q9BPX6 476 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 ANKRD60Q9BZ19 345 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 C1orf198Q9H425 327 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 C8orf17Q9NRJ1 99 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 UXTQ9UBK9 157 aaPredicted RBP1.4□□□□□ -2.19
GYPB-207ENST00000506679 HYOU1Q9Y4L1 999 aa1.4□□□□□ -2.19
GYPB-207ENST00000506679 IGKV1-8A0A0C4DH67 115 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 TRBV11-1A0A0K0K1C0 115 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 CENPVL3A0A0U1RRI6 287 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 SMCO3A2RU48 225 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 NCBP2LA6PVI3 153 aaKnown RBP1.39□□□□□ -2.19
GYPB-207ENST00000506679 C9JVG2 144 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 H7C417 338 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 L7N2F9 121 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 CLDN11O75508 207 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 OR2J3O76001 311 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 ZNF806P0C7X5 589 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 ERGP11308 486 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 GGT1P19440 569 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 U2AF2P26368 475 aaKnown RBP eCLIP1.39□□□□□ -2.19
GYPB-207ENST00000506679 LOXP28300 417 aaPredicted RBP1.39□□□□□ -2.19
GYPB-207ENST00000506679 SLC1A1P43005 524 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 PRMT2P55345 433 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 GFERP55789 205 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 RAB10P61026 200 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 STXBP1P61764 594 aaKnown RBP1.39□□□□□ -2.19
GYPB-207ENST00000506679 CDK5Q00535 292 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 SP4Q02446 784 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 SOHLH1Q5JUK2 328 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 PPM1LQ5SGD2 360 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 C9orf135Q5VTT2 229 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 GPR107Q5VW38 600 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 AP1ARQ63HQ0 302 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 REEP3Q6NUK4 255 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 NPSR1Q6W5P4 371 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 BBS5Q8N3I7 341 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 COX18Q8N8Q8 333 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 TMEM230Q96A57 120 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 MCUR1Q96AQ8 359 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 DCPSQ96C86 337 aaKnown RBP1.39□□□□□ -2.19
GYPB-207ENST00000506679 NUP58Q9BVL2 599 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 FGF23Q9GZV9 251 aaPredicted RBP1.39□□□□□ -2.19
GYPB-207ENST00000506679 VPS37BQ9H9H4 285 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 SLC38A10Q9HBR0 1119 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 TMEM165Q9HC07 324 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 RAB20Q9NX57 234 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 MTCH1Q9NZJ7 389 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 MTFP1Q9UDX5 166 aa1.39□□□□□ -2.19
GYPB-207ENST00000506679 COL5A1P20908 1838 aaPredicted RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 IGHV3OR16-8A0A075B7F1 116 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 IGHV3-72A0A0B4J1Y9 119 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 IGHV7-4-1A0A0J9YVY3 117 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 C5orf63A6NC05 138 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 KRBOX1C9JBD0 128 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 LGALS9O00182 355 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 AIM2O14862 343 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 RAD51CO43502 376 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 EIF4E2O60573 245 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 ERLIN1O75477 346 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 SEMA3DO95025 777 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 ARG1P05089 322 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 EIF4EP06730 217 aaKnown RBP1.38□□□□□ -2.19
GYPB-207ENST00000506679 ZNF688P0C7X2 276 aa1.38□□□□□ -2.19
GYPB-207ENST00000506679 ZNF24P17028 368 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms