RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 MEX3DQ86XN8 651 aaKnown RBP8.89□□□□□ -0.99
NR1I3-222ENST00000506018 CLDN22Q8N7P3 220 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 SLC25A40Q8TBP6 338 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 SLC7A13Q8TCU3 470 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 KLF14Q8TD94 323 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-222ENST00000506018 RAB1CQ92928 201 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 YIPF5Q969M3 257 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 TMEM186Q96B77 213 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 Q96M85 177 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 SOX7Q9BT81 388 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 OR2J1Q9GZK6 312 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 WNT5BQ9H1J7 359 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 PDP1Q9P0J1 537 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-222ENST00000506018 NKX1-2Q9UD57 310 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-222ENST00000506018 OAZ3Q9UMX2 235 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 ADAM18Q9Y3Q7 739 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 WNK2Q9Y3S1 2297 aa8.89□□□□□ -0.99
NR1I3-222ENST00000506018 LOC100509620A0A075B734 347 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 TRAV20A0A0B4J274 112 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 UNC119BA6NIH7 251 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 SAC3D1A6NKF1 404 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 H0YJX3 145 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 H7C1C5 153 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 SGCEO43556 437 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 TCF21O43680 179 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 TIMM8AO60220 97 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-222ENST00000506018 DOK2O60496 412 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 ICMTO60725 284 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 MSMBP08118 114 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 GAAP10253 952 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 CRABP1P29762 137 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 WNT5AP41221 380 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 HTR5AP47898 357 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 ALDH3A2P51648 485 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 RAD23AP54725 363 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 LSM6P62312 80 aaKnown RBP8.88□□□□□ -0.99
NR1I3-222ENST00000506018 LCN6P62502 163 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 COX10Q12887 443 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 MESTQ5EB52 335 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 SPATA46Q5T0L3 261 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 OGFRL1Q5TC84 451 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-222ENST00000506018 ACSM5Q6NUN0 579 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 DPY19L2P2Q6ZN68 376 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 TSEN54Q7Z6J9 526 aaKnown RBP8.88□□□□□ -0.99
NR1I3-222ENST00000506018 GLB1L2Q8IW92 636 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 PHC2Q8IXK0 858 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 ZNF101Q8IZC7 436 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 RFLNBQ8N5W9 214 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 ATG16L2Q8NAA4 619 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 OR10G2Q8NGC3 310 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 IPCEF1Q8WWN9 437 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-222ENST00000506018 MARS2Q96GW9 593 aaKnown RBP8.88□□□□□ -0.99
NR1I3-222ENST00000506018 RDH12Q96NR8 316 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 GPX7Q96SL4 187 aaPredicted RBP8.88□□□□□ -0.99
NR1I3-222ENST00000506018 CIB1Q99828 191 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 RACGAP1Q9H0H5 632 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 RERGLQ9H628 205 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 NTN4Q9HB63 628 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 NRIP3Q9NQ35 241 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 TBCCD1Q9NVR7 557 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 HIF1ANQ9NWT6 349 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 PLEK2Q9NYT0 353 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 TREM2Q9NZC2 230 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 SIGLEC7Q9Y286 467 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 POLR1DQ9Y2S0 133 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 DYSFO75923 2080 aa8.88□□□□□ -0.99
NR1I3-222ENST00000506018 FBN1P35555 2871 aaKnown RBP8.87□□□□□ -0.99
NR1I3-222ENST00000506018 J3QW42 95 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 SPRY3O43610 288 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 SLC16A7O60669 478 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 RP2O75695 350 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 LIMS1P48059 325 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 HSPA13P48723 471 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 CENPAP49450 140 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 MVKQ03426 396 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 FHL1Q13642 323 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 ENDOGQ14249 297 aaKnown RBP8.87□□□□□ -0.99
NR1I3-222ENST00000506018 SMARCD3Q6STE5 483 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 RFPL4BQ6ZWI9 263 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 FAM122BQ7Z309 247 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 JAZF1Q86VZ6 243 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 OR5L1Q8NGL2 311 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 OR4C15Q8NGM1 316 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 FANK1Q8TC84 345 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 GNPDA2Q8TDQ7 276 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 CCL17Q92583 94 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 RASD2Q96D21 266 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 DCLRE1CQ96SD1 692 aaKnown RBP8.87□□□□□ -0.99
NR1I3-222ENST00000506018 GABARAPL1Q9H0R8 117 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 SYT4Q9H2B2 425 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 EMC7Q9NPA0 242 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 VSX1Q9NZR4 365 aaPredicted RBP8.87□□□□□ -0.99
NR1I3-222ENST00000506018 CUBNO60494 3623 aa8.87□□□□□ -0.99
NR1I3-222ENST00000506018 TRBV4-1A0A0J9YWV2 114 aa8.86□□□□□ -0.99
NR1I3-222ENST00000506018 SOCS2O14508 198 aa8.86□□□□□ -0.99
NR1I3-222ENST00000506018 IMPA2O14732 288 aa8.86□□□□□ -0.99
NR1I3-222ENST00000506018 SURF4O15260 269 aa8.86□□□□□ -0.99
NR1I3-222ENST00000506018 PTP4A3O75365 173 aa8.86□□□□□ -0.99
NR1I3-222ENST00000506018 PNPP00491 289 aa8.86□□□□□ -0.99
NR1I3-222ENST00000506018 RENP00797 406 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms