RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	RPS2	P15880	293 aa	Known RBP	13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	CTLA4	P16410	223 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	GSK3B	P49841	420 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	GNB2	P62879	340 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	UBA52	P62987	128 aa	Known RBP	13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	ECH1	Q13011	328 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	BAMBI	Q13145	260 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	MEST	Q5EB52	335 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	SMARCD3	Q6STE5	483 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	HACD2	Q6Y1H2	254 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	OR8G5	Q8NG78	346 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	SPAG4	Q9NPE6	437 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	TMEM100	Q9NV29	134 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	PTTG3P	Q9NZH4	202 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	TMCC3	Q9ULS5	477 aa		13.82	□□□□□ -0.2
DDR1-256	ENST00000505066	CDC42EP2	O14613	210 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	FFAR1	O14842	300 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	SLC6A6	P31641	620 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	SLC6A9	P48067	706 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	KCNJ8	Q15842	424 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	SHISA2	Q6UWI4	295 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	OR8B3	Q8NGG8	313 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	OR52E2	Q8NGJ4	325 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	SLC7A13	Q8TCU3	470 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	ERMAP	Q96PL5	475 aa	Predicted RBP	13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	OR8B2	Q96RD0	313 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	PITX2	Q99697	317 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	COQ7	Q99807	217 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	NUAK2	Q9H093	628 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	NSRP1	Q9H0G5	558 aa	Known RBP	13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	NRIP3	Q9NQ35	241 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	VSX1	Q9NZR4	365 aa	Predicted RBP	13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	SIGLEC7	Q9Y286	467 aa		13.81	□□□□□ -0.2
DDR1-256	ENST00000505066	TMEM178B	H3BS89	294 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	NME4	O00746	187 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	IMPA2	O14732	288 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	RER1	O15258	196 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	NCK1	P16333	377 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	ZNF12	P17014	697 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	PSME3	P61289	254 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	ZMYND11	Q15326	602 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	GLYAT	Q6IB77	296 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	OR2T2	Q6IF00	324 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	FBXW12	Q6X9E4	464 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	FAM122B	Q7Z309	247 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	SIGLECL1	Q8N7X8	197 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	OR52J3	Q8NH60	311 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	FANK1	Q8TC84	345 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	GPX7	Q96SL4	187 aa	Predicted RBP	13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	IFT27	Q9BW83	186 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	SRA1	Q9HD15	236 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	OPN4	Q9UHM6	478 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	INSIG2	Q9Y5U4	225 aa		13.8	□□□□□ -0.2
DDR1-256	ENST00000505066	GADD45G	O95257	159 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	ZNF823	P16415	610 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	PRTN3	P24158	256 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	FPR3	P25089	353 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	ZFP36	P26651	326 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	TPTE	P56180	551 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	SPIB	Q01892	262 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	MZT1	Q08AG7	82 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	KCNMB1	Q16558	191 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	AWAT1	Q58HT5	328 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	LEG1	Q6P5S2	330 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	BHLHE23	Q8NDY6	225 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	OR10AD1	Q8NGE0	317 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	OR4C15	Q8NGM1	316 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	SPTSSA	Q969W0	71 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	ERGIC1	Q969X5	290 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	NEIL1	Q96FI4	390 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	MEGF10	Q96KG7	1140 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	SLC22A4	Q9H015	551 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	CCDC134	Q9H6E4	229 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	GCM1	Q9NP62	436 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	MED4	Q9NPJ6	270 aa		13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-256	ENST00000505066	CUBN	O60494	3623 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066		A8MXK9	166 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	IDH3B	O43837	385 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	OR10H3	O60404	316 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	PTP4A3	O75365	173 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	SASH3	O75995	380 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	LCAT	P04180	440 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	SCG5	P05408	212 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	CRYBA1	P05813	215 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	MMP16	P51512	607 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	DOK3	Q7L591	496 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	MRPL21	Q7Z2W9	205 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	DEFB108B	Q8NET1	73 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	OR52L1	Q8NGH7	329 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	SLC7A6	Q92536	515 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	ZDHHC16	Q969W1	377 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	TRIM36	Q9NQ86	728 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	NDUFAF4	Q9P032	175 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	CLN8	Q9UBY8	286 aa		13.78	□□□□□ -0.2
DDR1-256	ENST00000505066	CEACAM18	A8MTB9	384 aa		13.77	□□□□□ -0.21
DDR1-256	ENST00000505066		F5H5K5	113 aa		13.77	□□□□□ -0.21

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