RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 SIRT3Q9NTG7 399 aaPredicted RBP7.09□□□□□ -1.28
ATP2C1-208ENST00000504948 KCNS2Q9ULS6 477 aa7.09□□□□□ -1.28
ATP2C1-208ENST00000504948 NPIPA1Q9UND3 350 aa7.09□□□□□ -1.28
ATP2C1-208ENST00000504948 PAM16Q9Y3D7 125 aa7.09□□□□□ -1.28
ATP2C1-208ENST00000504948 RFPL4AA6NLU0 287 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 RFPL4AL1F8VTS6 287 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 LILRB5O75023 590 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 CLN5O75503 358 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PMS2P2O95744 297 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 F10P00742 488 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ABOP16442 354 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 OPRD1P41143 372 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ZXDAP98168 799 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PJVKQ0ZLH3 352 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PMS2P11Q13670 270 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 C1orf53Q5VUE5 145 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 WDR25Q64LD2 544 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 MFSD12Q6NUT3 480 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 TOMM20LQ6UXN7 152 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 OR52R1Q8NGF1 315 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 SCGB1C1Q8TD33 95 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PIGTQ969N2 578 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 BTF3L4Q96K17 158 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PRRT1Q99946 306 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 FAM212BQ9NTI7 297 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PLEKHJ1Q9NW61 149 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 CLDND1Q9NY35 253 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 CBY1Q9Y3M2 126 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 C1orf226A1L170 272 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ZNHIT1O43257 154 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 MBTPS2O43462 519 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ONECUT2O95948 504 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 IGFALSP35858 605 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 FGF8P55075 233 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ERVS71-1P61550 626 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 H3F3AP84243 136 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ZXDCQ2QGD7 858 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ZNF626Q68DY1 528 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 RPUSD3Q6P087 351 aaKnown RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 S100A7AQ86SG5 101 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ANGPTL5Q86XS5 388 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 CCDC54Q8NEL0 328 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 TSTD1Q8NFU3 115 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 C15orf40Q8WUR7 153 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 SMIM19Q96E16 107 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 DTD2Q96FN9 168 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GPHA2Q96T91 129 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ZNF2Q9BSG1 426 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 MRI1Q9BV20 369 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 HEXA-AS1Q9H8Q6 139 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 BRF2Q9HAW0 419 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 C7orf66A4D0T2 115 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 NFATC1O95644 943 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 TRGC2P03986 189 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GALTP07902 379 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 MGST1P10620 155 aaKnown RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 RAB5AP20339 215 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 BLVRBP30043 206 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GSK3AP49840 483 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 LBX1P52954 281 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ACVR1Q04771 509 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 KCTD18Q6PI47 426 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PLXDC2Q6UX71 529 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ZNF66Q6ZN08 573 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 FAM83HQ6ZRV2 1179 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 USP53Q70EK8 1073 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GRASPQ7Z6J2 395 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 SGPP2Q8IWX5 399 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PLPP5Q8NEB5 264 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 LSM2Q9Y333 95 aaKnown RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 KIAA1549LQ6ZVL6 1849 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 PTBP3O95758 552 aaKnown RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 DBHP09172 617 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 MPC1LP0DKB6 136 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GLRA1P23415 457 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 RPL12P30050 165 aaKnown RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 CTHP32929 405 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ELOCQ15369 112 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 VAMP3Q15836 100 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 ZNF792Q3KQV3 632 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GFI1BQ5VTD9 330 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 LILRB2Q8N423 598 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 OR5AP2Q8NGF4 316 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 OR51A2Q8NGJ7 313 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 OR6N1Q8NGY5 312 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 STT3BQ8TCJ2 826 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GGACTQ9BVM4 153 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GCM1Q9NP62 436 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 SERTAD4Q9NUC0 356 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 HRASLS2Q9NWW9 162 aa7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 GDF2Q9UK05 429 aaPredicted RBP7.08□□□□□ -1.28
ATP2C1-208ENST00000504948 A6NNC1 897 aa7.07□□□□□ -1.28
ATP2C1-208ENST00000504948 C1QTNF3-AMACRE9PGA6 284 aa7.07□□□□□ -1.28
ATP2C1-208ENST00000504948 SMIM6P0DI80 62 aa7.07□□□□□ -1.28
ATP2C1-208ENST00000504948 CD96P40200 585 aa7.07□□□□□ -1.28
ATP2C1-208ENST00000504948 GABRA4P48169 554 aa7.07□□□□□ -1.28
ATP2C1-208ENST00000504948 SULT1A1P50225 295 aa7.07□□□□□ -1.28
ATP2C1-208ENST00000504948 MCCD1P59942 119 aaPredicted RBP7.07□□□□□ -1.28
ATP2C1-208ENST00000504948 RING1Q06587 406 aa7.07□□□□□ -1.28
ATP2C1-208ENST00000504948 PDE7AQ13946 482 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms