RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 EDNRAP25101 427 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 FGF9P31371 208 aaPredicted RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 HMGCLP35914 325 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CEACAM3P40198 252 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 MAGEA6P43360 314 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 RANBP1P43487 201 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 DAP3P51398 398 aaKnown RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 KPNA2P52292 529 aaKnown RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CRISP1P54107 249 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 XGP55808 180 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CLDN6P56747 220 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 RAB14P61106 215 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ATP6V0D1P61421 351 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CYP24A1Q07973 514 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 GAGE5Q13069 117 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 GAGE6Q13070 117 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CD226Q15762 336 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SNRNP35Q16560 246 aaKnown RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ATP6V1FQ16864 119 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 KCTD19Q17RG1 926 aaPredicted RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 PGGHGQ32M88 737 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 UNC50Q53HI1 259 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SEL1L2Q5TEA6 688 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 IRAK1BP1Q5VVH5 260 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 EMBQ6PCB8 327 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SLC25A47Q6Q0C1 308 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TMEM207Q6UWW9 146 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 GSG1LQ6UXU4 331 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 NUFIP2Q7Z417 695 aaKnown RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CMC1Q7Z7K0 106 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 UNC93AQ86WB7 457 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 FUNDC1Q8IVP5 155 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SLC22A15Q8IZD6 547 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 KIRREL3Q8IZU9 778 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ZNF786Q8N393 782 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 BPIFB2Q8N4F0 458 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ZNF738Q8NE65 137 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR5B17Q8NGF7 314 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR6K6Q8NGW6 343 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 OR1L3Q8NH93 324 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SETD7Q8WTS6 366 aaKnown RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 HPSE2Q8WWQ2 592 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 UFD1Q92890 307 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 DUS3LQ96G46 650 aaKnown RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CENPNQ96H22 339 aaPredicted RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ZNF670Q9BS34 389 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 NEUROG2Q9H2A3 272 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 UBE2ZQ9H832 354 aaPredicted RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TRIM45Q9H8W5 580 aaPredicted RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 ZNF334Q9HCZ1 680 aaPredicted RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 RETNQ9HD89 108 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 SLC40A1Q9NP59 571 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 HRASLS2Q9NWW9 162 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 C1orf109Q9NX04 203 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CCDC59Q9P031 241 aaKnown RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 LSM7Q9UK45 103 aaKnown RBP3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 POU2F3Q9UKI9 436 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CFL2Q9Y281 166 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 KCNIP3Q9Y2W7 256 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 PLXNA3P51805 1871 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 TSC2P49815 1807 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 MUC6Q6W4X9 2439 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 MYO10Q9HD67 2058 aa3.53□□□□□ -1.84
PDLIM1P4-201ENST00000504327 CFAP47Q6ZTR5 3102 aa3.53□□□□□ -1.85
PDLIM1P4-201ENST00000504327 F5P12259 2224 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 NAV2Q8IVL1 2488 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 IGLV9-49A0A0B4J1Y8 123 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 PRR23AA6NEV1 266 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 OR5B21A6NL26 309 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 CYSRT1A8MQ03 144 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 DCTN6O00399 190 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 PLPP1O14494 284 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 PPP1R2P9O14990 202 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 TNFAIP8O95379 198 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 HPP00738 406 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 CRYAAP02489 173 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 FGGP02679 453 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 IFNA6P05013 189 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 C2P06681 752 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 IL9P15248 144 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 CTRB1P17538 263 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 IDSP22304 550 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 GPR183P32249 361 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 NBL1P41271 181 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 RBM34P42696 430 aaKnown RBP3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 TSFMP43897 325 aaKnown RBP3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 CSNK1A1P48729 337 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 RPL14P50914 215 aaKnown RBP3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 XKP51811 444 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 AP3S2P59780 193 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 POLR2GP62487 172 aaKnown RBP eCLIP3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 RPL8P62917 257 aaKnown RBP3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 TFAMQ00059 246 aaKnown RBP3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 ELAVL2Q12926 359 aaKnown RBP3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 GPR17Q13304 367 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 OR5I1Q13606 314 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 PSMD5Q16401 504 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 GABRA6Q16445 453 aa3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 TRMT5Q32P41 509 aaKnown RBP3.52□□□□□ -1.85
PDLIM1P4-201ENST00000504327 TMEM52BQ4KMG9 183 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms