RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 SLC38A10Q9HBR0 1119 aa1.97□□□□□ -2.09
UBE2B-203ENST00000503080 CCDC59Q9P031 241 aaKnown RBP1.97□□□□□ -2.09
UBE2B-203ENST00000503080 DUX4Q9UBX2 424 aa1.97□□□□□ -2.09
UBE2B-203ENST00000503080 VANGL2Q9ULK5 521 aa1.97□□□□□ -2.09
UBE2B-203ENST00000503080 TSSC4Q9Y5U2 329 aaPredicted RBP1.97□□□□□ -2.09
UBE2B-203ENST00000503080 COL27A1Q8IZC6 1860 aaPredicted RBP1.97□□□□□ -2.09
UBE2B-203ENST00000503080 CAMTA1Q9Y6Y1 1673 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 COL5A1P20908 1838 aaPredicted RBP1.96□□□□□ -2.1
UBE2B-203ENST00000503080 IGHV1OR15-9A0A0B4J2B8 117 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 RPL36A-HNRNPH2H7BZ11 118 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 H7C417 338 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 NVLO15381 856 aaKnown RBP1.96□□□□□ -2.1
UBE2B-203ENST00000503080 H6PDO95479 791 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 HLA-DQA1P01909 254 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 SERPINE2P07093 398 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 U2AF2P26368 475 aaKnown RBP eCLIP1.96□□□□□ -2.19e-7■■■■□ 20.3
UBE2B-203ENST00000503080 CRISP1P54107 249 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 ZNF816Q0VGE8 651 aaPredicted RBP1.96□□□□□ -2.1
UBE2B-203ENST00000503080 IFT88Q13099 833 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 PSMD5Q16401 504 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 ALKBH6Q3KRA9 238 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 HSP90AB3PQ58FF7 597 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 UBE2UQ5VVX9 321 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 LRRC66Q68CR7 880 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 ZFP1Q6P2D0 407 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 C12orf54Q6X4T0 127 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 BHLHA15Q7RTS1 189 aaPredicted RBP1.96□□□□□ -2.1
UBE2B-203ENST00000503080 CMC1Q7Z7K0 106 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 COX18Q8N8Q8 333 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 CHST4Q8NCG5 386 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 LINC01560Q8TB33 94 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 APH1BQ8WW43 257 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 N4BP2L2Q92802 583 aaPredicted RBP1.96□□□□□ -2.1
UBE2B-203ENST00000503080 DOK1Q99704 481 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 HSD17B10Q99714 261 aaKnown RBP1.96□□□□□ -2.1
UBE2B-203ENST00000503080 FAM192AQ9GZU8 254 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 OR52D1Q9H346 318 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 RETNQ9HD89 108 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 FBXO6Q9NRD1 293 aaPredicted RBP1.96□□□□□ -2.1
UBE2B-203ENST00000503080 NMRK1Q9NWW6 199 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 MTFP1Q9UDX5 166 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 RRP15Q9Y3B9 282 aaKnown RBP1.96□□□□□ -2.1
UBE2B-203ENST00000503080 AKNAQ7Z591 1439 aa1.96□□□□□ -2.1
UBE2B-203ENST00000503080 PTPRTO14522 1441 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 YEATS2Q9ULM3 1422 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 IGLV3-12A0A075B6K2 115 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 TRAV19A0A0A6YYK7 116 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 TRBV11-1A0A0K0K1C0 115 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 C5orf63A6NC05 138 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 ZNF233A6NK53 670 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 ZNF850A8MQ14 1090 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 K7EMT4 169 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 NDUFAB1O14561 156 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 RAD51CO43502 376 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 CHST1O43916 411 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 CDC40O60508 579 aaKnown RBP eCLIP1.95□□□□□ -2.1
UBE2B-203ENST00000503080 EIF4E2O60573 245 aaKnown RBP1.95□□□□□ -2.1
UBE2B-203ENST00000503080 ERLIN1O75477 346 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 CLDN11O75508 207 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 IL4P05112 153 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 OR8U9P0C7N5 309 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 CXCL12P48061 93 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 ZNF266Q14584 549 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 MPV17L2Q567V2 206 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 TCEAL5Q5H9L2 206 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 AVPI1Q5T686 147 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 CARD17Q5XLA6 110 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 SLC16A13Q7RTY0 426 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 CALHM3Q86XJ0 350 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 ZNF547Q8IVP9 402 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 CDKL3Q8IVW4 592 aaPredicted RBP1.95□□□□□ -2.1
UBE2B-203ENST00000503080 OSR2Q8N2R0 312 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 NPWQ8N729 165 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 OR52E2Q8NGJ4 325 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 OR6N1Q8NGY5 312 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 LILRB4Q8NHJ6 448 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 LYPD6BQ8NI32 183 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 CIRBP-AS1Q8TBR5 109 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 TCEAL3Q969E4 200 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 COL21A1Q96P44 957 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 TIMM29Q9BSF4 260 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 BEX1Q9HBH7 125 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 ZNF160Q9HCG1 818 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 PTTG3PQ9NZH4 202 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 RABL2BQ9UNT1 228 aa1.95□□□□□ -2.1
UBE2B-203ENST00000503080 DHX57Q6P158 1386 aaKnown RBP1.95□□□□□ -2.1
UBE2B-203ENST00000503080 TRBV9A0A0B4J1U6 114 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 CCDC169A6NNP5 214 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 H0YJW9 148 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 K7EM74 188 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 DNASE2O00115 360 aaPredicted RBP1.94□□□□□ -2.1
UBE2B-203ENST00000503080 AP3B1O00203 1094 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 SCAMP2O15127 329 aaKnown RBP1.94□□□□□ -2.1
UBE2B-203ENST00000503080 SOCS1O15524 211 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 REM1O75628 298 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 FLOT1O75955 427 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 CTSLP07711 333 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 ZNF688P0C7X2 276 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 CT45A6P0DMU7 189 aa1.94□□□□□ -2.1
UBE2B-203ENST00000503080 CT45A5P0DMU8 189 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms