RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 FGF20Q9NP95 211 aaPredicted RBP1.06□□□□□ -2.24
SMAD1-203ENST00000502342 ISY1Q9ULR0 285 aaKnown RBP1.06□□□□□ -2.24
SMAD1-203ENST00000502342 PALLDQ8WX93 1383 aa1.06□□□□□ -2.24
SMAD1-203ENST00000502342 ZSWIM8A7E2V4 1837 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 IGHV7-4-1A0A0J9YVY3 117 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 FAM240BA0A1B0GVZ2 78 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 SMCO2A6NFE2 343 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 OR5H1A6NKK0 313 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 GABRR3A8MPY1 467 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 NVLO15381 856 aaKnown RBP1.05□□□□□ -2.24
SMAD1-203ENST00000502342 KLHL41O60662 606 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 PLIN3O60664 434 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 IGHV3-11P01762 117 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 TNNI1P19237 187 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 FOXN2P32314 431 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 TALDO1P37837 337 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 RBM34P42696 430 aaKnown RBP1.05□□□□□ -2.24
SMAD1-203ENST00000502342 PLP1P60201 277 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 RPL23P62829 140 aaKnown RBP1.05□□□□□ -2.24
SMAD1-203ENST00000502342 BST2Q10589 180 aaKnown RBP1.05□□□□□ -2.24
SMAD1-203ENST00000502342 IL24Q13007 206 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 GPM6BQ13491 265 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 DMC1Q14565 340 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 ZNF235Q14590 738 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 PGGHGQ32M88 737 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 KRTAP6-3Q3LI67 103 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 CTSL3PQ5NE16 218 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 GPR107Q5VW38 600 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 TMEM136Q6ZRR5 245 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 NIPA1Q7RTP0 329 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 MRPL55Q7Z7F7 128 aaKnown RBP1.05□□□□□ -2.24
SMAD1-203ENST00000502342 TMEM150AQ86TG1 271 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 NBPF5PQ86XG9 351 aaPredicted RBP1.05□□□□□ -2.24
SMAD1-203ENST00000502342 EGFL6Q8IUX8 553 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 SGPP2Q8IWX5 399 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 PRELID2Q8N945 189 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 EIF1ADQ8N9N8 165 aaKnown RBP1.05□□□□□ -2.24
SMAD1-203ENST00000502342 SPANXA2-OT1Q8N9U9 137 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 CHST4Q8NCG5 386 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 SPATA4Q8NEY3 305 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 B3GNT7Q8NFL0 401 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 OR11H7Q8NGC8 314 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 TMEM230Q96A57 120 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 EEF1AKMT3Q96AZ1 226 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 TSGA13Q96PP4 275 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 LRRC40Q9H9A6 602 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 NEK6Q9HC98 313 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 UXTQ9UBK9 157 aaPredicted RBP1.05□□□□□ -2.24
SMAD1-203ENST00000502342 BLOC1S6Q9UL45 172 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 ZNF407Q9C0G0 2248 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 USP47Q96K76 1375 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 DENND4AQ7Z401 1863 aa1.05□□□□□ -2.24
SMAD1-203ENST00000502342 OTOGLQ3ZCN5 2332 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 IGHV3-49A0A0A0MS15 119 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 IGHV1-3A0A0C4DH29 117 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 A0A1B0GW55 424 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 ARHGEF35A5YM69 484 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 CEACAM18A8MTB9 384 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 KRBOX1C9JBD0 128 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 J3QRE1 110 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 MFNGO00587 321 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 AIM2O14862 343 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 RAB29O14966 203 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 FKBP6O75344 327 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 SPAG6O75602 509 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 PALMO75781 387 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 KLHL2O95198 593 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 ACSM4P0C7M7 580 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 DUX4L2P0CJ85 424 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 DUX4L3P0CJ86 424 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 DUX4L5P0CJ88 424 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 DUX4L6P0CJ89 424 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 DUX4L7P0CJ90 424 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 ZNF24P17028 368 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 LGALS3P17931 250 aaKnown RBP1.04□□□□□ -2.24
SMAD1-203ENST00000502342 U2AF2P26368 475 aaKnown RBP eCLIP1.04□□□□□ -2.244e-6■■■■■ 27.7
SMAD1-203ENST00000502342 HNRNPH3P31942 346 aaKnown RBP1.04□□□□□ -2.24
SMAD1-203ENST00000502342 NAA10P41227 235 aaPredicted RBP1.04□□□□□ -2.24
SMAD1-203ENST00000502342 NSG1P42857 185 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 SYKP43405 635 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 TMED10P49755 219 aaKnown RBP1.04□□□□□ -2.24
SMAD1-203ENST00000502342 GBX2P52951 348 aaPredicted RBP1.04□□□□□ -2.24
SMAD1-203ENST00000502342 SYNJ2BPP57105 145 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 RPS23P62266 143 aaKnown RBP1.04□□□□□ -2.24
SMAD1-203ENST00000502342 CYP24A1Q07973 514 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 ZNF266Q14584 549 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 IHHQ14623 411 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 TEX30Q5JUR7 227 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 H3F3CQ6NXT2 135 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 MBOAT1Q6ZNC8 495 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 UBE2J2Q8N2K1 259 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 CBR4Q8N4T8 237 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 SLC35G3Q8N808 338 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 OR8J1Q8NGP2 316 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 PHOSPHO2Q8TCD6 241 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 KLF14Q8TD94 323 aaPredicted RBP1.04□□□□□ -2.24
SMAD1-203ENST00000502342 COL21A1Q96P44 957 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 SLC29A1Q99808 456 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 C1orf50Q9BV19 199 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 ZSCAN16Q9H4T2 348 aaPredicted RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms