RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 OR9A2Q8NGT5 310 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 ACTRT1Q8TDG2 376 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 MAIP1Q8WWC4 291 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 GEMIN6Q8WXD5 167 aaKnown RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 EFHD2Q96C19 240 aaPredicted RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 OPTNQ96CV9 577 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 AURKBQ96GD4 344 aaPredicted RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 SH3YL1Q96HL8 342 aaPredicted RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 ITCHQ96J02 903 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 DNAJC1Q96KC8 554 aaKnown RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 C7orf34Q96L11 122 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 C12orf66Q96MD2 445 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 C18orf15Q96N68 181 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 FAM111AQ96PZ2 611 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 OR2A5Q96R48 311 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 RIT2Q99578 217 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 OMDQ99983 421 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 SULT4A1Q9BR01 284 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 MRPL45Q9BRJ2 306 aaKnown RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 NIPSNAP3BQ9BS92 247 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 RIOK2Q9BVS4 552 aaKnown RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 RAB34Q9BZG1 259 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 TMEM117Q9H0C3 514 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 DNTTIP1Q9H147 329 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 DPH5Q9H2P9 285 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 MFSD1Q9H3U5 465 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 REEP4Q9H6H4 257 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 NHEJ1Q9H9Q4 299 aaPredicted RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 ZFP14Q9HCL3 533 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 ZNRD1Q9P1U0 126 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 GNG12Q9UBI6 72 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 SEC14L3Q9UDX4 400 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 FETUBQ9UGM5 382 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 SHPKQ9UHJ6 478 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 STAP1Q9ULZ2 295 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 RPH3ALQ9UNE2 315 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 NUDCQ9Y266 331 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 ARFGEF3Q5TH69 2177 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 MROH7Q68CQ1 1323 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 THADAQ6YHU6 1953 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 ANKRD36BQ8N2N9 1353 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 ABCC12Q96J65 1359 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 NCAPD2Q15021 1401 aa0.3□□□□□ -2.36
SGMS1-205ENST00000498514 EDC4Q6P2E9 1401 aaKnown RBP0.3□□□□□ -2.36
SGMS1-205ENST00000498514 CCDC141Q6ZP82 1450 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 SYNE1Q8NF91 8797 aaKnown RBP0.29□□□□□ -2.36
SGMS1-205ENST00000498514 TNRC6BQ9UPQ9 1833 aaKnown RBP0.29□□□□□ -2.36
SGMS1-205ENST00000498514 PTPRFP10586 1907 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 DUOX1Q9NRD9 1551 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 TRAV6A0A075B6T7 132 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 IGKV1D-8A0A087WSZ0 117 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 NSG1A0A0A6YYJ2 146 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 IGHV5-10-1A0A0J9YXX1 117 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 TMEM223A0PJW6 202 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 PLAC8L1A1L4L8 177 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 LRP5LA4QPB2 252 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 TRIM64A6NGJ6 449 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 TRIM64BA6NI03 449 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 A8MXQ7 604 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 C12orf77C9JDV5 145 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 BTN3A3O00478 584 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 SDHDO14521 159 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 DYNC1I1O14576 645 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 MAPK13O15264 365 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 CHADO15335 359 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 POLR2DO15514 142 aaKnown RBP0.29□□□□□ -2.36
SGMS1-205ENST00000498514 TAPBPO15533 448 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 ZSCAN12O43309 604 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 MED7O43513 233 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 CHST1O43916 411 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 MGRN1O60291 552 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 SEC22BO75396 215 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 SCGB2A1O75556 95 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 IDH1O75874 414 aaKnown RBP0.29□□□□□ -2.36
SGMS1-205ENST00000498514 AP2A1O95782 977 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 GAPDHP04406 335 aaKnown RBP0.29□□□□□ -2.36
SGMS1-205ENST00000498514 HLA-DPB1P04440 258 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 FGF1P05230 155 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 CAPN1P07384 714 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 CSF3P09919 207 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 ZNF806P0C7X5 589 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 C1GALT1C1LP0DN25 315 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 IGHV1-8P0DP01 117 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 CCDC130P13994 396 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 ZNF30P17039 623 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 FUT1P19526 365 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 TCN1P20061 433 aaPredicted RBP0.29□□□□□ -2.36
SGMS1-205ENST00000498514 NPR2P20594 1047 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 CNR1P21554 472 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 NT5EP21589 574 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 SLC2A5P22732 501 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 CYP2F1P24903 491 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 AK4P27144 223 aaPredicted RBP0.29□□□□□ -2.36
SGMS1-205ENST00000498514 GCAP28676 217 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 CASP14P31944 242 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 RORAP35398 523 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 ATP6V1E1P36543 226 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 HSD17B2P37059 387 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 DDOSTP39656 456 aa0.29□□□□□ -2.36
SGMS1-205ENST00000498514 RPL13AP40429 203 aaKnown RBP0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms