RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 PSMB6P28072 239 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 GNA11P29992 359 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 PCK1P35558 622 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 RFX3P48380 749 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 STX3Q13277 289 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 SLC5A12Q1EHB4 618 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 LY6G6FQ5SQ64 297 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CCNJQ5T5M9 372 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 KCTD16Q68DU8 428 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 ACSM5Q6NUN0 579 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 Q6P435 159 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 ENPP6Q6UWR7 440 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CXCL17Q6UXB2 119 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 NIPA1Q7RTP0 329 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 HSD11B1LQ7Z5J1 315 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CYP4Z1Q86W10 505 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 DHRSXQ8N5I4 330 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 Q8N9L7 120 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 LRRC75AQ8NAA5 344 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 GPR151Q8TDV0 419 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 AENQ8WTP8 325 aaKnown RBP3.61□□□□□ -1.83
SF3B1-212ENST00000496458 UBE2E3Q969T4 207 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 PSMG2Q969U7 264 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CCDC124Q96CT7 223 aaKnown RBP3.61□□□□□ -1.83
SF3B1-212ENST00000496458 ECHDC3Q96DC8 303 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CSPG4P5Q96PW8 444 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CNN2Q99439 309 aaKnown RBP3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CIB1Q99828 191 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CTRCQ99895 268 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 DHRS9Q9BPW9 319 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 NICN1Q9BSH3 213 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 API5Q9BZZ5 524 aaKnown RBP3.61□□□□□ -1.83
SF3B1-212ENST00000496458 NIPAL2Q9H841 368 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 POPDC2Q9HBU9 364 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 C8orf4Q9NR00 106 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 GPATCH2LQ9NWQ4 482 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 GID8Q9NWU2 228 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 MS4A12Q9NXJ0 267 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 SLC39A1Q9NY26 324 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 NKIRAS1Q9NYS0 192 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 EMC3Q9P0I2 261 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 HMGXB4Q9UGU5 601 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 NUP50Q9UKX7 468 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 POFUT2Q9Y2G5 429 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 HEY1Q9Y5J3 304 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 ALG6Q9Y672 507 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 MROH7Q68CQ1 1323 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 CEP350Q5VT06 3117 aa3.61□□□□□ -1.83
SF3B1-212ENST00000496458 C1orf232A0A0U1RR37 186 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 GMNCA6NCL1 334 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 ITGB1BP1O14713 200 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 ZBTB5O15062 677 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 SCAMP2O15127 329 aaKnown RBP3.6□□□□□ -1.83
SF3B1-212ENST00000496458 SLC22A1O15245 554 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 SIVA1O15304 175 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 OR10H3O60404 316 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 PFKFB2O60825 505 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 LYPLA1O75608 230 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-212ENST00000496458 MMP23AO75900 390 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 SCELO95171 688 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 OR5F1O95221 314 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 ALDOBP05062 364 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 HBQ1P09105 142 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 PAEPP09466 180 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 NQO1P15559 274 aaKnown RBP3.6□□□□□ -1.83
SF3B1-212ENST00000496458 CRABP2P29373 138 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 EVI2BP34910 448 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 PHBP35232 272 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 CFHR2P36980 270 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 P2RY2P41231 377 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 MRPL19P49406 292 aaKnown RBP3.6□□□□□ -1.83
SF3B1-212ENST00000496458 EMDP50402 254 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 PSMD4P55036 377 aaKnown RBP3.6□□□□□ -1.83
SF3B1-212ENST00000496458 ATP5J2P56134 94 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 GNG11P61952 73 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 VSNL1P62760 191 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 KCNJ2P63252 427 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 LCN2P80188 198 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 ZNF45Q02386 682 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 RIPPLY1Q0D2K3 151 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 DGCR6Q14129 220 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 VGLL4Q14135 290 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 GRB7Q14451 532 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 KCNJ11Q14654 390 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 CYTH1Q15438 398 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 UBE2V2Q15819 145 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 C9orf135Q5VTT2 229 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 METTL21CQ5VZV1 264 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 OR5M10Q6IEU7 315 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 SCYL2Q6P3W7 929 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 FAM173BQ6P4H8 233 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 ULK3Q6PHR2 472 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 C19orf35Q6ZS72 473 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 SLC16A14Q7RTX9 510 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 PID1Q7Z2X4 250 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 ABHD12BQ7Z5M8 362 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-212ENST00000496458 NUDCD3Q8IVD9 361 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 APRG1Q8IVJ8 170 aa3.6□□□□□ -1.83
SF3B1-212ENST00000496458 NELFCDQ8IXH7 590 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms