RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 PCYT1BQ9Y5K3 369 aaPredicted RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 TICRRQ7Z2Z1 1910 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 CYTIPO60759 359 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 AGR2O95994 175 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 HMGN2P05204 90 aaKnown RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 OR8U9P0C7N5 309 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 EDN3P14138 238 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 DAOP14920 347 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 MAKP20794 623 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 CHATP28329 748 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 CD200P41217 278 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 KIR3DL2P43630 455 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 SPINT3P49223 89 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 DHPSP49366 369 aaPredicted RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 DIO1P49895 249 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 CCR4P51679 360 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 SUCLG1P53597 346 aaKnown RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 ADAM8P78325 824 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 SCGB2B2Q4G0G5 96 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 CCSMST1Q4G0I0 132 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 PRRT3Q5FWE3 981 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 GGNBP1Q5YKI7 109 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 C9orf40Q8IXQ3 194 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 TRAM1L1Q8N609 369 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 OR9K2Q8NGE7 335 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 OR8U1Q8NH10 309 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 KLK6Q92876 244 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 CCDC74AQ96AQ1 378 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 BSCL2Q96G97 398 aaPredicted RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 WDR92Q96MX6 357 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 CST11Q9H112 138 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 MTHFD2LQ9H903 347 aaPredicted RBP8.17□□□□□ -1.1
HPS4-217ENST00000496385 PITPNC1Q9UKF7 332 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 OR51B4Q9Y5P0 310 aa8.17□□□□□ -1.1
HPS4-217ENST00000496385 DUXAA6NLW8 204 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 HSPB2A8KAH6 182 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 PRAMEF26H0Y7S4 382 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 RAB27BO00194 218 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 PHOX2AO14813 284 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 AGPAT2O15120 278 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 EFSO43281 561 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 FRS3O43559 492 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 NTN1O95631 604 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 PDGFBP01127 241 aaPredicted RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 OR5AC1P0C628 307 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 CLUP10909 449 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 FABP4P15090 132 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 CXCR1P25024 350 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 G0S2P27469 103 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SERPINF1P36955 418 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SGSHP51688 502 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SNRPNP63162 240 aaKnown RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 DLK1P80370 383 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 HSPB2Q16082 182 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 ZNF684Q5T5D7 378 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 C9orf64Q5T6V5 341 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 YOD1Q5VVQ6 348 aaPredicted RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 OPN5Q6U736 354 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 THSD4Q6ZMP0 1018 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 LANCL3Q6ZV70 420 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SZRD1Q7Z422 152 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 ZNF595Q8IYB9 648 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 KDM8Q8N371 416 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 ZNF664Q8N3J9 261 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 ZNF283Q8N7M2 679 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 BPIFA2Q96DR5 249 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 RCC1LQ96I51 464 aaKnown RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 ZNF385AQ96PM9 386 aaKnown RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 F2RL3Q96RI0 385 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 MS4A8Q9BY19 250 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 MBD1Q9UIS9 605 aaPredicted RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 FBXO7Q9Y3I1 522 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 USP34Q70CQ2 3546 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 WDR87Q6ZQQ6 2873 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 CXorf51AA0A1B0GTR3 108 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 TRDCB7Z8K6 153 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 H0YIZ8 118 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SLC17A2O00624 439 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 C1orf105O95561 183 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 GPANK1O95872 356 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 TBPP20226 339 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SKP1P63208 163 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 GLO1Q04760 184 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 MESP2Q0VG99 397 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 LASP1Q14847 261 aaKnown RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 ISXQ2M1V0 245 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SLC35D2Q76EJ3 337 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 FAM129CQ86XR2 697 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 TMEM25Q86YD3 366 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SFTPA1Q8IWL2 248 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 RFLNBQ8N5W9 214 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 OR7D2Q96RA2 312 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SLC6A7Q99884 636 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 TMEM208Q9BTX3 173 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 CNTNAP3Q9BZ76 1288 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 OR2S2Q9NQN1 319 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 ZNF443Q9Y2A4 671 aaPredicted RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 AMDHD2Q9Y303 409 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 MED31Q9Y3C7 131 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 MRPS18CQ9Y3D5 142 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms