RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 OR2Z1Q8NG97 314 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 OR4K13Q8NH42 304 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 FANK1Q8TC84 345 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 NMNAT3Q96T66 252 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 CDADC1Q9BWV3 514 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 G6PC2Q9NQR9 355 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 IL19Q9UHD0 177 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 NPTNQ9Y639 398 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 CUBNO60494 3623 aa10.79□□□□□ -0.68
PTPRF-214ENST00000496043 IGLV1-36A0A0B4J1U3 117 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 A0A0G2JMP0 313 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 A0A0X1KG70 313 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 J3QLI3 93 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 DCTN6O00399 190 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 GPANK1O95872 356 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 DBHP09172 617 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 HIST1H1CP16403 213 aaKnown RBP10.78□□□□□ -0.68
PTPRF-214ENST00000496043 GSSP48637 474 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 HMGA2P52926 109 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 TSPAN31Q12999 210 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 MEP1BQ16820 701 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 SPRNQ5BIV9 151 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 FBXW12Q6X9E4 464 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 Q6ZR03 302 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 LINC00471Q8N535 108 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 ATG16L2Q8NAA4 619 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 OR4M2Q8NGB6 313 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 OR2AJ1Q8NGZ0 328 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 ST7LQ8TDW4 575 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 APOBEC3DQ96AK3 386 aaPredicted RBP10.78□□□□□ -0.68
PTPRF-214ENST00000496043 COQ7Q99807 217 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 HDHD2Q9H0R4 259 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 TMEM106BQ9NUM4 274 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 UBAP1Q9NZ09 502 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 PCDHB10Q9UN67 800 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 LHFPL6Q9Y693 200 aa10.78□□□□□ -0.68
PTPRF-214ENST00000496043 B2RBV5 119 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 GATA3P23771 443 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 COX10Q12887 443 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 ECH1Q13011 328 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 DCAF12L2Q5VW00 463 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 CORO6Q6QEF8 472 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 ZBTB46Q86UZ6 589 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF283Q8N7M2 679 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 OR8G5Q8NG78 346 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 OR13G1Q8NGZ3 307 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF418Q8TF45 676 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-214ENST00000496043 NSL1Q96IY1 281 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF582Q96NG8 517 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-214ENST00000496043 RPRD1BQ9NQG5 326 aaKnown RBP10.77□□□□□ -0.69
PTPRF-214ENST00000496043 PTTG3PQ9NZH4 202 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 ACTR3BQ9P1U1 418 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 PPP1R3CQ9UQK1 317 aa10.77□□□□□ -0.69
PTPRF-214ENST00000496043 OR6C68A6NDL8 312 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 IFNL4K9M1U5 179 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 TNFRSF11BO00300 401 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 FOXH1O75593 365 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 AVPP01185 164 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 IGHV2-70P01814 119 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 HLA-DQA2P01906 255 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 HLXQ14774 488 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-214ENST00000496043 RSPO1Q2MKA7 263 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-214ENST00000496043 SLC35F1Q5T1Q4 408 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 OR2T2Q6IF00 324 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 RPL13AP3Q6NVV1 102 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 PGBD2Q6P3X8 592 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 CYP2R1Q6VVX0 501 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 C1orf229Q6ZS94 237 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF771Q7L3S4 317 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-214ENST00000496043 LRRC28Q86X40 367 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-214ENST00000496043 OR5AS1Q8N127 324 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 KLHL36Q8N4N3 616 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 SPICQ8N5J4 248 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 SLC26A10Q8NG04 563 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 OR52E2Q8NGJ4 325 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 NANPQ8TBE9 248 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 ITLN1Q8WWA0 313 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 PITX2Q99697 317 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 TMPRSS13Q9BYE2 586 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 TRIM15Q9C019 465 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 C7orf69Q9H7B7 122 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 SVEP1Q4LDE5 3571 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 STAB1Q9NY15 2570 aa10.76□□□□□ -0.69
PTPRF-214ENST00000496043 LOC105371242A0A075B767 164 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 F5H5K5 113 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 VENTXO95231 258 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 GASTP01350 101 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF823P16415 610 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 SELEP16581 610 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 SRP9P49458 86 aaKnown RBP10.75□□□□□ -0.69
PTPRF-214ENST00000496043 ERFP50548 548 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 LCN2P80188 198 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.75□□□□□ -0.69
PTPRF-214ENST00000496043 TMEM155Q4W5P6 130 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 CLEC12AQ5QGZ9 265 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 SLC18B1Q6NT16 456 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 ZNF620Q6ZNG0 422 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 COLCA1Q6ZS62 124 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 C1QL2Q7Z5L3 287 aa10.75□□□□□ -0.69
PTPRF-214ENST00000496043 LINC00346Q8IVM7 164 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms