RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ST7LQ8TDW4 575 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 THEM6Q8WUY1 208 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 ASB17Q8WXJ9 295 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 ABHD6Q9BV23 337 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 PNRC2Q9NPJ4 139 aaKnown RBP14.77□□□□□ -0.05
HDAC6-235ENST00000495515 TBCCD1Q9NVR7 557 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 GRIP1Q9Y3R0 1128 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 CMAHPQ9Y471 501 aa14.77□□□□□ -0.05
HDAC6-235ENST00000495515 F5H5K5 113 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 APOC1P02654 83 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 RAF1P04049 648 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 LCKP06239 509 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 SBK2P0C263 348 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 FAM157BP0CG42 384 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 BMP4P12644 408 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 GABRB1P18505 474 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 ALOX5APP20292 161 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 TUBG1P23258 451 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 TTKP33981 857 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 THBS4P35443 961 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 SERPINF1P36955 418 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 MTNR1AP48039 350 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 AQP4P55087 323 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 SELENOVP59797 346 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 RGS7BPQ6MZT1 257 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-235ENST00000495515 KCTD18Q6PI47 426 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-235ENST00000495515 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-235ENST00000495515 SLC35F2Q8IXU6 374 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 C8orf59Q8N0T1 100 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-235ENST00000495515 MUC15Q8N387 334 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 RNF133Q8WVZ7 376 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 PIGTQ969N2 578 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 CCL19Q99731 98 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 ADGRL4Q9HBW9 690 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 TUBG2Q9NRH3 451 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 FBXO9Q9UK97 447 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-235ENST00000495515 CADP27708 2225 aa14.76□□□□□ -0.05
HDAC6-235ENST00000495515 TEX15Q9BXT5 2789 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF670-ZNF695F2Z2N8 137 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 SMPD2O60906 423 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 H2BFMP0C1H6 154 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 OR4A8P0C604 315 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 PSKH1P11801 424 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 DNASE1P24855 282 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 HSD11B1P28845 292 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 VHLP40337 213 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 WNT5AP41221 380 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 MAD2L1BPQ15013 274 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-235ENST00000495515 OR5L1Q8NGL2 311 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 OR10S1Q8NGN2 331 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 OR1J1Q8NGS3 322 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 ABHD4Q8TB40 342 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 TMEM171Q8WVE6 324 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 SLC7A6Q92536 515 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 TFAP2CQ92754 450 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 NINJ1Q92982 152 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 APOBEC3DQ96AK3 386 aaPredicted RBP14.75□□□□□ -0.05
HDAC6-235ENST00000495515 KCNJ15Q99712 375 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 OR51B6Q9H340 312 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 SP140LQ9H930 580 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 CBLN4Q9NTU7 201 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 ST6GALNAC2Q9UJ37 374 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 LAMP3Q9UQV4 416 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 RPL36Q9Y3U8 105 aaKnown RBP14.75□□□□□ -0.05
HDAC6-235ENST00000495515 PCDHGB1Q9Y5G3 927 aa14.75□□□□□ -0.05
HDAC6-235ENST00000495515 B9A039 149 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 M0R135 149 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 CLIC3O95833 236 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 DBHP09172 617 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 OR2T7P0C7T2 308 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 DANCRP0C864 163 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 ADIPOQQ15848 244 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 KRTAP27-1Q3LI81 207 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF718Q3SXZ3 478 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 DEGS2Q6QHC5 323 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 DRAM2Q6UX65 266 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 IZUMO2Q6UXV1 221 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 SPATC1Q76KD6 591 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 KRT77Q7Z794 578 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 CDH24Q86UP0 819 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 DTX2Q86UW9 622 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF101Q8IZC7 436 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 OR2T27Q8NH04 317 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 NRGNQ92686 78 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 RNFT2Q96EX2 444 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF799Q96GE5 643 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 MYCBPQ99417 103 aaPredicted RBP14.74□□□□□ -0.05
HDAC6-235ENST00000495515 MROQ9BYG7 248 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 RASSF4Q9H2L5 321 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 PLK3Q9H4B4 646 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 CXorf56Q9H5V9 222 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 NIPAL2Q9H841 368 aa14.74□□□□□ -0.05
HDAC6-235ENST00000495515 H3BSA7 217 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 GPRIN2O60269 458 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 ZNF254O75437 659 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 ACSM4P0C7M7 580 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 GCH1P30793 250 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 OTX1P32242 354 aaPredicted RBP14.73□□□□□ -0.05
HDAC6-235ENST00000495515 OPRL1P41146 370 aa14.73□□□□□ -0.05
HDAC6-235ENST00000495515 SLC6A9P48067 706 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms