RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 COG8Q96MW5 612 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 DCLRE1CQ96SD1 692 aaKnown RBP13.23□□□□□ -0.29
LIMS2-216ENST00000494613 BTBD10Q9BSF8 475 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 CDADC1Q9BWV3 514 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 MUC13Q9H3R2 512 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 LPAR2Q9HBW0 351 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 HIF1ANQ9NWT6 349 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-216ENST00000494613 POLR1DQ9Y2S0 133 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 WIPI2Q9Y4P8 454 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 MXRA5Q9NR99 2828 aa13.23□□□□□ -0.29
LIMS2-216ENST00000494613 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.23□□□□□ -0.29
LIMS2-216ENST00000494613 CLDN25C9JDP6 229 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 CCNB2O95067 398 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 MSMBP08118 114 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 CD55P08174 381 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 RAC2P15153 192 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 TNFAIP6P98066 277 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-216ENST00000494613 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.22□□□□□ -0.29
LIMS2-216ENST00000494613 COX10Q12887 443 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 HLXQ14774 488 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-216ENST00000494613 SLC36A3Q495N2 470 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 LCN8Q6JVE9 175 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 ACSM5Q6NUN0 579 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 NAA40Q86UY6 237 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 GLCCI1Q86VQ1 547 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 SDR9C7Q8NEX9 313 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 OR5L1Q8NGL2 311 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 TMEM186Q96B77 213 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 TIMD4Q96H15 378 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 FN3KQ9H479 309 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 MAGIXQ9H6Y5 334 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 ZNF665Q9H7R5 613 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 ATPIF1Q9UII2 106 aa13.22□□□□□ -0.29
LIMS2-216ENST00000494613 BHLHE40O14503 412 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 SRP14P37108 136 aaKnown RBP13.21□□□□□ -0.29
LIMS2-216ENST00000494613 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
LIMS2-216ENST00000494613 RGS6P49758 472 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 HNRNPA0Q13151 305 aaKnown RBP13.21□□□□□ -0.29
LIMS2-216ENST00000494613 MICAQ29983 383 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 FAM98BQ52LJ0 330 aaKnown RBP13.21□□□□□ -0.29
LIMS2-216ENST00000494613 ZMAT1Q5H9K5 638 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 OR2T5Q6IEZ7 315 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 SLC18B1Q6NT16 456 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 RPL13AP3Q6NVV1 102 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 RASSF6Q6ZTQ3 369 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 LINC00346Q8IVM7 164 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 PHC2Q8IXK0 858 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 CYB561A3Q8NBI2 242 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 OR2Z1Q8NG97 314 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 OR2AJ1Q8NGZ0 328 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 OR2T29Q8NH02 315 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 ZNRF4Q8WWF5 429 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 APOBEC3DQ96AK3 386 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-216ENST00000494613 CLPTM1LQ96KA5 538 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 PITX2Q99697 317 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 COQ7Q99807 217 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 PLA2G12AQ9BZM1 189 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 C1orf21Q9H246 121 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 MRPL22Q9NWU5 206 aaKnown RBP13.21□□□□□ -0.29
LIMS2-216ENST00000494613 VNN3Q9NY84 501 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 PTTG3PQ9NZH4 202 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 CYB5R1Q9UHQ9 305 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 CDH10Q9Y6N8 788 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 U3KQV3 271 aa13.21□□□□□ -0.29
LIMS2-216ENST00000494613 PLPP2O43688 288 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 DEAF1O75398 565 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-216ENST00000494613 PCMT1P22061 227 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 PYCR1P32322 319 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 GGT2P36268 569 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 ERFP50548 548 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 SRSF2Q01130 221 aaKnown RBP13.2□□□□□ -0.3
LIMS2-216ENST00000494613 SLC3A1Q07837 685 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 OR2T2Q6IF00 324 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 FAHD2BQ6P2I3 314 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-216ENST00000494613 FBXW12Q6X9E4 464 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 CFAP77Q6ZQR2 320 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 PEG10Q86TG7 708 aaKnown RBP13.2□□□□□ -0.3
LIMS2-216ENST00000494613 OR5AS1Q8N127 324 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 AQP11Q8NBQ7 271 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 OR52L1Q8NGH7 329 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 OR8D4Q8NGM9 314 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 OR51F2Q8NH61 342 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 POP5Q969H6 163 aaKnown RBP13.2□□□□□ -0.3
LIMS2-216ENST00000494613 FAHD2AQ96GK7 314 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 THTPAQ9BU02 230 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 TSSK6Q9BXA6 273 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 HDHD2Q9H0R4 259 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 FAM53CQ9NYF3 392 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 IL19Q9UHD0 177 aa13.2□□□□□ -0.3
LIMS2-216ENST00000494613 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
LIMS2-216ENST00000494613 TRAV20A0A0B4J274 112 aa13.19□□□□□ -0.3
LIMS2-216ENST00000494613 F5H5K5 113 aa13.19□□□□□ -0.3
LIMS2-216ENST00000494613 J3QW42 95 aa13.19□□□□□ -0.3
LIMS2-216ENST00000494613 ACOT8O14734 319 aa13.19□□□□□ -0.3
LIMS2-216ENST00000494613 IGHV2-5P01817 119 aa13.19□□□□□ -0.3
LIMS2-216ENST00000494613 SBK2P0C263 348 aa13.19□□□□□ -0.3
LIMS2-216ENST00000494613 ZNF823P16415 610 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms