RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 DNAJC24Q6P3W2 148 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 ZFP2Q6ZN57 461 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 SLC7A13Q8TCU3 470 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 CXorf40AQ8TE69 158 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 CCDC126Q96EE4 140 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 KCTD14Q9BQ13 255 aaPredicted RBP2.8□□□□□ -1.96
SMC4-224ENST00000494612 NUP58Q9BVL2 599 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 GPR61Q9BZJ8 451 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 IFI27L2Q9H2X8 130 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 VCXQ9H320 206 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 ANKRA2Q9H9E1 313 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 TMED5Q9Y3A6 229 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 CEP290O15078 2479 aa2.8□□□□□ -1.96
SMC4-224ENST00000494612 A0A1B0GUL6 1792 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 PLAC8L1A1L4L8 177 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 ZNF716A6NP11 495 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 DYNC1I1O14576 645 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 UTS2O95399 124 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 BGLAPP02818 100 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 FABP3P05413 133 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 ZNF735P0CB33 412 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 ADRB3P13945 408 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 ZNF250P15622 560 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 ZNF32P17041 273 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 SERPINB5P36952 375 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 PEX19P40855 299 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 UBE2AP49459 152 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 SUCLG1P53597 346 aaKnown RBP2.79□□□□□ -1.96
SMC4-224ENST00000494612 SLC7A9P82251 487 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 HMGCS1Q01581 520 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 PAX5Q02548 391 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 GBE1Q04446 702 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 RCN1Q15293 331 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 LRRC26Q2I0M4 334 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 TTLL9Q3SXZ7 439 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 SOHLH1Q5JUK2 328 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 CCDC73Q6ZRK6 1079 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 STRADAQ7RTN6 431 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 BBS5Q8N3I7 341 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 LIX1Q8N485 282 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 SPATA4Q8NEY3 305 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 RHEBL1Q8TAI7 183 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 ZNF502Q8TBZ5 544 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 ZFP90Q8TF47 636 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 FAM3DQ96BQ1 224 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 FAM210BQ96KR6 192 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 OR5B12Q96R08 314 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 SLC29A1Q99808 456 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 FGF20Q9NP95 211 aaPredicted RBP2.79□□□□□ -1.96
SMC4-224ENST00000494612 MAST2Q6P0Q8 1798 aa2.79□□□□□ -1.96
SMC4-224ENST00000494612 MUC3AQ02505 3323 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 SCN2AQ99250 2005 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 DNAH12Q6ZR08 3092 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.78□□□□□ -1.96
SMC4-224ENST00000494612 A0A0U1RQS6 177 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 ZNF816-ZNF321PA0A0X1KG74 233 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 DLGAP1O14490 977 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 RAB29O14966 203 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 SNAI2O43623 268 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 AIFM1O95831 613 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 PRB2P02812 416 aaPredicted RBP2.78□□□□□ -1.96
SMC4-224ENST00000494612 IGKV5-2P06315 115 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 GNAO1P09471 354 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 ZNF24P17028 368 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 TFPI2P48307 235 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 CCNHP51946 323 aaPredicted RBP2.78□□□□□ -1.96
SMC4-224ENST00000494612 TCP10Q12799 353 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 PRPSAP1Q14558 356 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 PON3Q15166 354 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 SHHQ15465 462 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 KCTD19Q17RG1 926 aaPredicted RBP2.78□□□□□ -1.96
SMC4-224ENST00000494612 PTPN20Q4JDL3 420 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 FKBP1CQ5VVH2 108 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 SLC8B1Q6J4K2 584 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 SASS6Q6UVJ0 657 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 ZNF493Q6ZR52 646 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 TMEM179Q6ZVK1 233 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 OAFQ86UD1 273 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 ZFP41Q8N8Y5 198 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 Q8N976 141 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 ZNF596Q8TC21 504 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 PKNOX2Q96KN3 472 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 BMFQ96LC9 184 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 TSSK3Q96PN8 268 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 P2RX4Q99571 388 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 FAM192AQ9GZU8 254 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 SAMSN1Q9NSI8 373 aaKnown RBP2.78□□□□□ -1.96
SMC4-224ENST00000494612 PTTG3PQ9NZH4 202 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 CAB39Q9Y376 341 aaPredicted RBP2.78□□□□□ -1.96
SMC4-224ENST00000494612 CDH23Q9H251 3354 aa2.78□□□□□ -1.96
SMC4-224ENST00000494612 LTBP2Q14767 1821 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 DOCK2Q92608 1830 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 CUL9Q8IWT3 2517 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 IGLV4-69A0A075B6H9 119 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 IGLV11-55A0A075B6I3 123 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 OR2AG2A6NM03 316 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 H0YC42 278 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 AIM2O14862 343 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 ANGPTL7O43827 346 aa2.77□□□□□ -1.97
SMC4-224ENST00000494612 SPAG7O75391 227 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms