RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SH2D1BO14796 132 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 OIP5O43482 229 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 OR2F2O95006 317 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 SLC2A1P11166 492 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 GABRB1P18505 474 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 OR2F1Q13607 317 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 CLINT1Q14677 625 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 OR51A4Q8NGJ6 313 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 CNRIP1Q96F85 164 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-207ENST00000494090 ZNF416Q9BWM5 594 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 BANF2Q9H503 90 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 LILRA5A6NI73 299 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 MKRN2OSH3BPM6 223 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 ICMTO60725 284 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 CNIH1O95406 144 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 YIPF5Q969M3 257 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 TMEFF2Q9UIK5 374 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-207ENST00000494090 FOLR1P15328 257 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 CD1EP15812 388 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 PPIAP62937 165 aaKnown RBP17.41■□□□□ 0.38
COL27A1-207ENST00000494090 RNF165Q6ZSG1 346 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 ZNF573Q86YE8 665 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 C16orf52Q8NHV5 167 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 PATE1Q8WXA2 126 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 TTC9Q92623 222 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 RHNO1Q9BSD3 238 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 OR11A1Q9GZK7 315 aa17.41■□□□□ 0.38
COL27A1-207ENST00000494090 TMEM127O75204 238 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 LAP3P28838 519 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 SOX18P35713 384 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 NUMA1Q14980 2115 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 LFNGQ8NES3 379 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 OR10R2Q8NGX6 335 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 ZNF705GA8MUZ8 300 aaPredicted RBP17.4■□□□□ 0.38
COL27A1-207ENST00000494090 STMND1H3BQB6 276 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 PSMB3P49720 205 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 LIMS2Q7Z4I7 341 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 EMC6Q9BV81 110 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 S1PR5Q9H228 398 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 SLCO1B1Q9Y6L6 691 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 APEHP13798 732 aaKnown RBP17.4■□□□□ 0.38
COL27A1-207ENST00000494090 NPBWR1P48145 328 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 OR10A3P58181 314 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 SNTB1Q13884 538 aaKnown RBP17.4■□□□□ 0.38
COL27A1-207ENST00000494090 KIAA1958Q8N8K9 716 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 HSD17B11Q8NBQ5 300 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 OR1N1Q8NGS0 311 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 NT5CQ8TCD5 201 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 SRRQ9GZT4 340 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 ERVMER34-1Q9H9K5 563 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 FRG2CA6NGY1 282 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 CEACAM5P06731 702 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 LSRQ86X29 649 aaPredicted RBP17.4■□□□□ 0.38
COL27A1-207ENST00000494090 CACFD1Q9UGQ2 172 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 CCSO14618 274 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 PHLDA2Q53GA4 152 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 OR13C5Q8NGS8 318 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 OR51E1Q8TCB6 317 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 SMCO4Q9NRQ5 59 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 NDRG3Q9UGV2 375 aa17.4■□□□□ 0.38
COL27A1-207ENST00000494090 M0R135 149 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 C12orf73Q69YU5 71 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 BSCL2Q96G97 398 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF799Q96GE5 643 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 SLC35E1Q96K37 410 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 TAF9BQ9HBM6 251 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF225Q9UK10 706 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 RAD52P43351 418 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 BTG2P78543 158 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF626Q68DY1 528 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 HPSE2Q8WWQ2 592 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 SPNS1Q9H2V7 528 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 NUDT19A8MXV4 375 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 VWA2Q5GFL6 755 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 OR10K2Q6IF99 312 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 FAM199XQ6PEV8 388 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ZNF75AQ96N20 296 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 NIPSNAP3BQ9BS92 247 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 DEFB127Q9H1M4 99 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 GPR173Q9NS66 373 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ATP23Q9Y6H3 246 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ST8SIA3O43173 380 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ICOSLGO75144 302 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 Q6ZRG5 221 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ANKRD53Q8N9V6 530 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ZC3HAV1LQ96H79 300 aaKnown RBP17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ATF6BQ99941 703 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 OPA3Q9H6K4 179 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 PLAC1Q9HBJ0 212 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 SLC6A13Q9NSD5 602 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 TAS2R5Q9NYW4 299 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 ASH2LQ9UBL3 628 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 HDGFL3Q9Y3E1 203 aa17.39■□□□□ 0.37
COL27A1-207ENST00000494090 PCYT1BQ9Y5K3 369 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-207ENST00000494090 PRSS37A4D1T9 235 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 HSD17B6O14756 317 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 CCR2P41597 374 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 STAC2Q6ZMT1 411 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 RHOUQ7L0Q8 258 aa17.38■□□□□ 0.37
COL27A1-207ENST00000494090 ISG20L2Q9H9L3 353 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms