RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	ZCCHC23	Q6ZST2	131 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	PTOV1	Q86YD1	416 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	LAS2	Q8IYD9	372 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	C17orf78	Q8N4C9	275 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	AMER3	Q8N944	861 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR51D1	Q8NGF3	324 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	COQ8A	Q8NI60	647 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	GAL3ST3	Q96A11	431 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	SLC41A3	Q96GZ6	507 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	PGAM5	Q96HS1	289 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	MUS81	Q96NY9	551 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	MS4A8	Q9BY19	250 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	ITPA	Q9BY32	194 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	AICDA	Q9GZX7	198 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	SMURF2	Q9HAU4	748 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	RHOF	Q9HBH0	211 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	DMRT3	Q9NQL9	472 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	PITPNC1	Q9UKF7	332 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	TPRKB	Q9Y3C4	175 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	RHBDD3	Q9Y3P4	386 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919	RBM7	Q9Y580	266 aa	Known RBP	10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919		V9GYH0	126 aa		10.43	□□□□□ -0.74
BRCA1-222	ENST00000493919		A0A1B0GW15	77 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919		A0A1W2PPE3	182 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	CDC14C	A4D256	554 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	CD8B2	A6NJW9	211 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	INMT-MINDY4	F8WBC2	141 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919		K7ENP7	123 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	CXCR6	O00574	342 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	NKX2-8	O15522	239 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	TBX6	O95947	436 aa	Predicted RBP	10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	RAB40AL	P0C0E4	278 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	NR2F6	P10588	404 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	SLC2A5	P22732	501 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	ANOS1	P23352	680 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	TNFSF4	P23510	183 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	OTX2	P32243	289 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	CASR	P41180	1078 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	RPS13	P62277	151 aa	Known RBP	10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	EIF5A	P63241	154 aa	Known RBP	10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	IL10RA	Q13651	578 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	CEBPE	Q15744	281 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	TAF9	Q16594	264 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	NKG7	Q16617	165 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	VWA2	Q5GFL6	755 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	GPR157	Q5UAW9	335 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	FRG2	Q64ET8	278 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	INO80C	Q6PI98	192 aa	Predicted RBP	10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	MED25	Q71SY5	747 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	OVCH1	Q7RTY7	1134 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	TMEM144	Q7Z5S9	345 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	IFNE	Q86WN2	208 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	RNF130	Q86XS8	419 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR4K14	Q8NGD5	310 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR56B1	Q8NGI3	324 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	STT3B	Q8TCJ2	826 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	HIST1H2BA	Q96A08	127 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	COQ8B	Q96D53	544 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	MS4A6E	Q96DS6	147 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	FRG2B	Q96QU4	278 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR2M2	Q96R28	347 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	F2RL3	Q96RI0	385 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	TMUB1	Q9BVT8	246 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	RAB1B	Q9H0U4	201 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	ABCG5	Q9H222	651 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	SLC2A9	Q9NRM0	540 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	LRFN1	Q9P244	771 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	TUBD1	Q9UJT1	453 aa		10.42	□□□□□ -0.74
BRCA1-222	ENST00000493919	MEIKIN	A0A087WXM9	373 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	ANXA2P2	A6NMY6	339 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919		H0YIG0	161 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	ZNF264	O43296	627 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	GALR3	O60755	368 aa	Predicted RBP	10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	IL6R	P08887	468 aa	Predicted RBP	10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	XCR1	P46094	333 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	RPL14	P50914	215 aa	Known RBP	10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	BTN3A2	P78410	334 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	RBPJ	Q06330	500 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	MEP1B	Q16820	701 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	GGTA1P	Q4G0N0	100 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	NSUN5P2	Q63ZY6	315 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	GLYAT	Q6IB77	296 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR52W1	Q6IF63	320 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	REEP3	Q6NUK4	255 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	MRPL14	Q6P1L8	145 aa	Known RBP	10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	HS3ST5	Q8IZT8	346 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	SHISA5	Q8N114	240 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR4A15	Q8NGL6	344 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR13C8	Q8NGS7	320 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR2Y1	Q8NGV0	311 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	ADGRG7	Q96K78	797 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	PANX1	Q96RD7	426 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	SPATA5L1	Q9BVQ7	753 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	GATA5	Q9BWX5	397 aa	Predicted RBP	10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	UPB1	Q9UBR1	384 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	OR14J1	Q9UGF5	321 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	ADAM29	Q9UKF5	820 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	FIS1	Q9Y3D6	152 aa		10.41	□□□□□ -0.74
BRCA1-222	ENST00000493919	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.41	□□□□□ -0.74

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