RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 GPANK1O95872 356 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 CYB5R3P00387 301 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-210ENST00000493682 PLATP00750 562 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 DBHP09172 617 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 RPS2P15880 293 aaKnown RBP14.54□□□□□ -0.08
COL9A1-210ENST00000493682 LSM6P62312 80 aaKnown RBP14.54□□□□□ -0.08
COL9A1-210ENST00000493682 GNB2P62879 340 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 MAPRE2Q15555 327 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 OR2T2Q6IF00 324 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 FBXW12Q6X9E4 464 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 KLBQ86Z14 1044 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 GLB1L2Q8IW92 636 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 OR8G5Q8NG78 346 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 OR13G1Q8NGZ3 307 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 RAB40AQ8WXH6 277 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 DACT3Q96B18 629 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-210ENST00000493682 RASD2Q96D21 266 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 SLITRK2Q9H156 845 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 RERGLQ9H628 205 aa14.54□□□□□ -0.08
COL9A1-210ENST00000493682 GMPR2Q9P2T1 348 aaKnown RBP14.54□□□□□ -0.08
COL9A1-210ENST00000493682 COA3Q9Y2R0 106 aaPredicted RBP14.54□□□□□ -0.08
COL9A1-210ENST00000493682 MDFIC2A0A1B0GVS7 189 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 H0YL77 283 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 IMPA2O14732 288 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 RER1O15258 196 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 KHDRBS3O75525 346 aaKnown RBP14.53□□□□□ -0.08
COL9A1-210ENST00000493682 MDKP21741 143 aaPredicted RBP14.53□□□□□ -0.08
COL9A1-210ENST00000493682 SRP9P49458 86 aaKnown RBP14.53□□□□□ -0.08
COL9A1-210ENST00000493682 RGS6P49758 472 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 DEFA6Q01524 100 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 KRR1Q13601 381 aaKnown RBP14.53□□□□□ -0.08
COL9A1-210ENST00000493682 PDLIM3Q53GG5 364 aaPredicted RBP14.53□□□□□ -0.08
COL9A1-210ENST00000493682 POU5F2Q8N7G0 328 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 OR5L1Q8NGL2 311 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 PLEKHA8Q96JA3 519 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 ZNF582Q96NG8 517 aaPredicted RBP14.53□□□□□ -0.08
COL9A1-210ENST00000493682 TMEM246Q9BRR3 403 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 SYT4Q9H2B2 425 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 NMNAT1Q9HAN9 279 aaPredicted RBP14.53□□□□□ -0.08
COL9A1-210ENST00000493682 MIOXQ9UGB7 285 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 ATPIF1Q9UII2 106 aa14.53□□□□□ -0.08
COL9A1-210ENST00000493682 TRAV40A0A0B4J280 105 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 IGHV3-64DA0A0J9YX35 117 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 KIR2DS1A0A191URI9 304 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 MLNRO43193 412 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 ZNF682O95780 498 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 SDHAP31040 664 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 SF3A3Q12874 501 aaKnown RBP eCLIP14.52□□□□□ -0.09
COL9A1-210ENST00000493682 IFI44LQ53G44 452 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 C16orf87Q6PH81 154 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 SPATC1Q76KD6 591 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 MOGAT3Q86VF5 341 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 APOBEC3DQ96AK3 386 aaPredicted RBP14.52□□□□□ -0.09
COL9A1-210ENST00000493682 TMIGD2Q96BF3 282 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 NEIL1Q96FI4 390 aaPredicted RBP14.52□□□□□ -0.09
COL9A1-210ENST00000493682 SLC30A2Q9BRI3 323 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 NDEL1Q9GZM8 345 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 CMTM6Q9NX76 183 aa14.52□□□□□ -0.09
COL9A1-210ENST00000493682 VSX1Q9NZR4 365 aaPredicted RBP14.52□□□□□ -0.09
COL9A1-210ENST00000493682 F5H5P2 479 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 PTP4A3O75365 173 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 FSTL3O95633 263 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 OMGP23515 440 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 KCNMB1Q16558 191 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 ZNF181Q2M3W8 571 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 ZNF404Q494X3 552 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 FAM201AQ5SY85 155 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 GPR139Q6DWJ6 353 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 RRM2BQ7LG56 351 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 BHLHE23Q8NDY6 225 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 OR8B3Q8NGG8 313 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 FAM46AQ96IP4 442 aaKnown RBP14.51□□□□□ -0.09
COL9A1-210ENST00000493682 OR8B2Q96RD0 313 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 NUAK2Q9H093 628 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 NRIP3Q9NQ35 241 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 TMEM5Q9Y2B1 443 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 POLR1DQ9Y2S0 133 aa14.51□□□□□ -0.09
COL9A1-210ENST00000493682 LRRC30A6NM36 301 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 IQCF6A8MYZ5 107 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 CXCR6O00574 342 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 SOCS2O14508 198 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 HOXA3O43365 443 aaPredicted RBP14.5□□□□□ -0.09
COL9A1-210ENST00000493682 NDUFB2O95178 105 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 TROVE2P10155 538 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL9A1-210ENST00000493682 PMELP40967 661 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 PITPNBP48739 271 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 DEFB112Q30KQ8 113 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 BRD3OSQ6XYD6 125 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 PTCHD4Q6ZW05 846 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 FKBP9P1Q75LS8 142 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 CBLL1Q75N03 491 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 NLRC3Q7RTR2 1065 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 TSEN54Q7Z6J9 526 aaKnown RBP14.5□□□□□ -0.09
COL9A1-210ENST00000493682 SLC15A3Q8IY34 581 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 OR10S1Q8NGN2 331 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 SLC7A13Q8TCU3 470 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 RCN3Q96D15 328 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 HSH2DQ96JZ2 352 aa14.5□□□□□ -0.09
COL9A1-210ENST00000493682 GPX7Q96SL4 187 aaPredicted RBP14.5□□□□□ -0.09
COL9A1-210ENST00000493682 COQ7Q99807 217 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms