RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 SMIM3Q9BZL3 60 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 ELOVL3Q9HB03 270 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 PDE7BQ9NP56 450 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 KCNK6Q9Y257 313 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 MMP24Q9Y5R2 645 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 MPDZO75970 2070 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 A0A087WV62 115 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 NME2P1O60361 137 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 TSPAN15O95858 294 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 IFNA6P05013 189 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CT62P0C5K7 136 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 HIST1H1BP16401 226 aaKnown RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 TSFMP43897 325 aaKnown RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CTXN1P60606 82 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 FHL5Q5TD97 284 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 GFI1BQ5VTD9 330 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 EIF5AL1Q6IS14 154 aaKnown RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 SLC43A2Q8N370 569 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 UBAC2Q8NBM4 344 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 RCBTB1Q8NDN9 531 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 SMARCD2Q92925 531 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 AQP10Q96PS8 301 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 NUDT9Q9BW91 350 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 PARP11Q9NR21 331 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 SPHK2Q9NRA0 654 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 UMAD1C9J7I0 102 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 CSTBP04080 98 aaKnown RBP10.5□□□□□ -0.73
HDAC4-210ENST00000493582 SOD2P04179 222 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 DPTQ07507 201 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 TCEA2Q15560 299 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 MEP1BQ16820 701 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 MIDNQ504T8 468 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 CLEC9AQ6UXN8 241 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF574Q6ZN55 896 aaPredicted RBP10.5□□□□□ -0.73
HDAC4-210ENST00000493582 OR52E1Q8NGJ3 308 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 OR8D1Q8WZ84 308 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 MALSU1Q96EH3 234 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 MISP3Q96FF7 219 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 LURAP1Q96LR2 239 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 SMOC1Q9H4F8 434 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 PARPBPQ9NWS1 579 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 HEATR5AQ86XA9 2040 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 CACNA1IQ9P0X4 2223 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 A0A087X0M5 115 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 A0A1B0GX30 115 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 DDTP30046 118 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 PEBP1P30086 187 aaKnown RBP10.5□□□□□ -0.73
HDAC4-210ENST00000493582 CCR2P41597 374 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 FHITP49789 147 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 MESP2Q0VG99 397 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 HMGN3Q15651 99 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 C17orf99Q6UX52 265 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 ANKRD33Q7Z3H0 272 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 REC114Q7Z4M0 266 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 VN1R4Q7Z5H5 301 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 TAF8Q7Z7C8 310 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 ADGRE4PQ86SQ3 457 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 ANGPTL5Q86XS5 388 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 EXD3Q8N9H8 876 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 METTL8Q9H825 291 aaKnown RBP10.5□□□□□ -0.73
HDAC4-210ENST00000493582 PPP4R1LQ9P1A2 415 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 FBXL21Q9UKT6 434 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 DHDHQ9UQ10 334 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 OR1A2Q9Y585 309 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 WNT6Q9Y6F9 365 aa10.5□□□□□ -0.73
HDAC4-210ENST00000493582 A0A1B0GV50 99 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 MED19A0JLT2 244 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 BTBD17A6NE02 478 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 CFPP27918 469 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF616Q08AN1 781 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 RSU1Q15404 277 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 GUK1Q16774 197 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 FAHD2BQ6P2I3 314 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 SPNS3Q6ZMD2 512 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 CRIPAKQ8N1N5 446 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 CPNE4Q96A23 557 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 FAHD2AQ96GK7 314 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 SLC25A44Q96H78 314 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 JSRP1Q96MG2 331 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 MOGAT1Q96PD6 335 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 ZDHHC8Q9ULC8 765 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 SOX1O00570 391 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 FGF17O60258 216 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 OR2C1O95371 312 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 IGKV1D-16P01601 117 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 OR13C7P0DN81 318 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 NPY4RP50391 375 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 HEPN1Q6WQI6 88 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 CACUL1Q86Y37 369 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 TMEM104Q8NE00 496 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 OR4D6Q8NGJ1 314 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 OR13C9Q8NGT0 318 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 ASB5Q8WWX0 329 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 MR1Q95460 341 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF587Q96SQ5 575 aaPredicted RBP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 CDC6Q99741 560 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 SUCNR1Q9BXA5 334 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 GPR61Q9BZJ8 451 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 HCFC1R1Q9NWW0 138 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms