RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 EMC7Q9NPA0 242 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 ASH2LQ9UBL3 628 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 AURKCQ9UQB9 309 aa9.76□□□□□ -0.85
COL6A3-213ENST00000493475 A0A1B0GUS0 222 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 DNAJC9-AS1A6NH13 148 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 TMEM178BH3BS89 294 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 H7C1C5 153 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 CLDN34H7C241 214 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 SLC16A7O60669 478 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 RNASE1P07998 156 aaKnown RBP9.75□□□□□ -0.85
COL6A3-213ENST00000493475 EGR1P18146 543 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 GPR4P46093 362 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 YAP1P46937 504 aaKnown RBP9.75□□□□□ -0.85
COL6A3-213ENST00000493475 LCN6P62502 163 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 ZMYND11Q15326 602 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 SLC36A3Q495N2 470 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 JAZF1Q86VZ6 243 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 CLDN22Q8N7P3 220 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 OR8G5Q8NG78 346 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 RP9Q8TA86 221 aaKnown RBP9.75□□□□□ -0.85
COL6A3-213ENST00000493475 ITLN1Q8WWA0 313 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 DVL3Q92997 716 aaPredicted RBP9.75□□□□□ -0.85
COL6A3-213ENST00000493475 ERGIC1Q969X5 290 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 NEIL1Q96FI4 390 aaPredicted RBP9.75□□□□□ -0.85
COL6A3-213ENST00000493475 CDADC1Q9BWV3 514 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 TRIM36Q9NQ86 728 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 SAR1AQ9NR31 198 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 RHCGQ9UBD6 479 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 PCDHGB1Q9Y5G3 927 aa9.75□□□□□ -0.85
COL6A3-213ENST00000493475 WNK2Q9Y3S1 2297 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 CEACAM18A8MTB9 384 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 CXCR6O00574 342 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 CCDC22O60826 627 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 FSTL3O95633 263 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 RENP00797 406 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 H1F0P07305 194 aaKnown RBP9.74□□□□□ -0.85
COL6A3-213ENST00000493475 ZFP36P26651 326 aaKnown RBP9.74□□□□□ -0.85
COL6A3-213ENST00000493475 IFNGR2P38484 337 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 MMP16P51512 607 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 SMIM11AP58511 58 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 LIPEQ05469 1076 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 ECH1Q13011 328 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 ZNF181Q2M3W8 571 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 MESTQ5EB52 335 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 FGD3Q5JSP0 725 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 ZNF362Q5T0B9 420 aaPredicted RBP9.74□□□□□ -0.85
COL6A3-213ENST00000493475 FBXW12Q6X9E4 464 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 PARP8Q8N3A8 854 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 LRRC75AQ8NAA5 344 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 OR2AJ1Q8NGZ0 328 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 Q96M85 177 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 COQ7Q99807 217 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 SLC22A4Q9H015 551 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 SYT4Q9H2B2 425 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 EFCAB1Q9HAE3 211 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 GCM1Q9NP62 436 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 ESM1Q9NQ30 184 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 MMP26Q9NRE1 261 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 TMEM100Q9NV29 134 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 CLN8Q9UBY8 286 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 ZNF69Q9UC07 566 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 SAMD4AQ9UPU9 718 aaKnown RBP9.74□□□□□ -0.85
COL6A3-213ENST00000493475 STARD10Q9Y365 291 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 ADAM18Q9Y3Q7 739 aa9.74□□□□□ -0.85
COL6A3-213ENST00000493475 A0A087WUU8 490 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 A0A1W2PRQ8 180 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 F5H0A9 414 aaPredicted RBP9.73□□□□□ -0.85
COL6A3-213ENST00000493475 TMPRSS2O15393 492 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 SERPINA1P01009 418 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 CTLA4P16410 223 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 NOS3P29474 1203 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 NPY4RP50391 375 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 MZT1Q08AG7 82 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 DGCR6Q14129 220 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 GPR157Q5UAW9 335 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 CD276Q5ZPR3 534 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 DPY19L2P2Q6ZN68 376 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 C17orf107Q6ZR85 190 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 C9orf139Q6ZV77 190 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 CBLL1Q75N03 491 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 VTCN1Q7Z7D3 282 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 KLBQ86Z14 1044 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 OR5AS1Q8N127 324 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 CELF2-AS1Q8N7Q2 184 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 SPRYD4Q8WW59 207 aaPredicted RBP9.73□□□□□ -0.85
COL6A3-213ENST00000493475 RAB40AQ8WXH6 277 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 RCN3Q96D15 328 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 FAM46AQ96IP4 442 aaKnown RBP9.73□□□□□ -0.85
COL6A3-213ENST00000493475 HSH2DQ96JZ2 352 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 MEGF10Q96KG7 1140 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 KCTD14Q9BQ13 255 aaPredicted RBP9.73□□□□□ -0.85
COL6A3-213ENST00000493475 UNKLQ9H9P5 680 aaKnown RBP9.73□□□□□ -0.85
COL6A3-213ENST00000493475 PTTG3PQ9NZH4 202 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 VSX1Q9NZR4 365 aaPredicted RBP9.73□□□□□ -0.85
COL6A3-213ENST00000493475 COA3Q9Y2R0 106 aaPredicted RBP9.73□□□□□ -0.85
COL6A3-213ENST00000493475 ENPP4Q9Y6X5 453 aa9.73□□□□□ -0.85
COL6A3-213ENST00000493475 IGHV2-70DA0A0C4DH43 119 aa9.72□□□□□ -0.85
COL6A3-213ENST00000493475 TRAPPC2LH3BP13 241 aa9.72□□□□□ -0.85
COL6A3-213ENST00000493475 J3KTA2 159 aa9.72□□□□□ -0.85
COL6A3-213ENST00000493475 SOCS2O14508 198 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms