RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 CCNB1P14635 433 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 TBPP20226 339 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 KITLGP21583 273 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 STOMP27105 288 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ETV1P50549 477 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 HILS1P60008 231 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 TWF1Q12792 350 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CEP85LQ5SZL2 805 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ZC2HC1BQ5TFG8 222 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 RAB43Q86YS6 212 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 SKA3Q8IX90 412 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 INO80EQ8NBZ0 244 aaPredicted RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 SLC7A13Q8TCU3 470 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 NEIL2Q969S2 332 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 TM4SF19Q96DZ7 209 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 MBOAT4Q96T53 435 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 MRPL45Q9BRJ2 306 aaKnown RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 NICN1Q9BSH3 213 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 KRTAP9-3Q9BYQ3 159 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 UCK1Q9HA47 277 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ADAP2Q9NPF8 381 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 MED29Q9NX70 200 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 GIN1Q9NXP7 522 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CD274Q9NZQ7 290 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 RIMS3Q9UJD0 308 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 GNPTGQ9UJJ9 305 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 BZW2Q9Y6E2 419 aaKnown RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 TEP1Q99973 2627 aaKnown RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 DOPEY2Q9Y3R5 2298 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 A0A087X002 238 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 A0A1B0GWB2 263 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 E9PQ18 207 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CDC40O60508 579 aaKnown RBP eCLIP2.38□□□□□ -2.03
SNX13-209ENST00000492626 DUSP14O95147 198 aaKnown RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 FGGP02679 453 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 GSTM3P21266 225 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 MNAT1P51948 309 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CTAG1AP78358 180 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CSNK1G2P78368 415 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 REEP3Q6NUK4 255 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 C16orf47Q6ZP98 133 aaPredicted RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 NOTCH2NLQ7Z3S9 236 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ZADH2Q8N4Q0 377 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 FANK1Q8TC84 345 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 C17orf50Q8WW18 174 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 SH3GL1Q99961 368 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 BCL7BQ9BQE9 202 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 RANBP3Q9H6Z4 567 aaPredicted RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 ANKRA2Q9H9E1 313 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 SIAEQ9HAT2 523 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 DDX19BQ9UMR2 479 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 FLVCR2Q9UPI3 526 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 MMP24Q9Y5R2 645 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ASXL3Q9C0F0 2248 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CROCCQ5TZA2 2017 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 IGKV3D-15A0A087WSY6 115 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 NSG1A0A0A6YYJ2 146 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 TMEM120BA0PK00 339 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 MEX3AA1L020 520 aaKnown RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 LYRM9A8MSI8 78 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 M0R3G1 203 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 NDUFS8O00217 210 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 SAP18O00422 153 aaKnown RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 LYPLA1O75608 230 aaPredicted RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 ALDOBP05062 364 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 GZMAP12544 262 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CYTH1Q15438 398 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 LRRC36Q1X8D7 754 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ADNP2Q6IQ32 1131 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CMC1Q7Z7K0 106 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 TMEM252Q8N6L7 170 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 OR13F1Q8NGS4 319 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ACMSDQ8TDX5 336 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 PAQR8Q8TEZ7 354 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 GLYATL2Q8WU03 294 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ING5Q8WYH8 240 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 C8orf44Q96CB5 159 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 SLC29A1Q99808 456 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 ECSITQ9BQ95 431 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 CCDC28BQ9BUN5 200 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 SRXN1Q9BYN0 137 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 PIGUQ9H490 435 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 HRASLS2Q9NWW9 162 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 PEF1Q9UBV8 284 aaKnown RBP2.38□□□□□ -2.03
SNX13-209ENST00000492626 ERVW-1Q9UQF0 538 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 PRSS21Q9Y6M0 314 aa2.38□□□□□ -2.03
SNX13-209ENST00000492626 DCTN6O00399 190 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 GATA1P15976 413 aaPredicted RBP2.37□□□□□ -2.03
SNX13-209ENST00000492626 DYNLL1P63167 89 aaKnown RBP2.37□□□□□ -2.03
SNX13-209ENST00000492626 LIPEQ05469 1076 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 CLINT1Q14677 625 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 AANATQ16613 207 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 NRF1Q16656 503 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 ALKBH6Q3KRA9 238 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 AADACL4Q5VUY2 407 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 TMIGD1Q6UXZ0 262 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 HSD17B13Q7Z5P4 300 aaPredicted RBP2.37□□□□□ -2.03
SNX13-209ENST00000492626 ZNF589Q86UQ0 364 aaPredicted RBP2.37□□□□□ -2.03
SNX13-209ENST00000492626 PDIK1LQ8N165 341 aa2.37□□□□□ -2.03
SNX13-209ENST00000492626 LRRC20Q8TCA0 184 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms