RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PTGS2P35354 604 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 MNDAP41218 407 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 CLRN1P58418 232 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 ELFN2Q5R3F8 820 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 GLT8D1Q68CQ7 371 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 FDX2Q6P4F2 183 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 CARFQ8N187 725 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 ACTR6Q9GZN1 396 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF319Q9P2F9 582 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 SCP2D1Q9UJQ7 156 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 KLK13Q9UKR3 277 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 LHFPL6Q9Y693 200 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 PMS2P1A4D2B8 440 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 ARPC5O15511 151 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 SCO1O75880 301 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 TGM6O95932 706 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 IGFBP3P17936 291 aaPredicted RBP11.07□□□□□ -0.64
HMGN1-220ENST00000492280 RPS18P62269 152 aaKnown RBP11.07□□□□□ -0.64
HMGN1-220ENST00000492280 PMPCAQ10713 525 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 C4orf46Q504U0 113 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 CHST4Q8NCG5 386 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 OR4K17Q8NGC6 315 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 SEH1LQ96EE3 360 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 FAM71F1Q96KD3 344 aaPredicted RBP11.07□□□□□ -0.64
HMGN1-220ENST00000492280 EXO5Q9H790 373 aa11.07□□□□□ -0.64
HMGN1-220ENST00000492280 DOCK10Q96BY6 2186 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 E9PLN8 166 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 ZFAND5O76080 213 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 SLC22A5O76082 557 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 TPOP07202 933 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 OR3A3P47888 321 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 RBMS2Q15434 407 aaKnown RBP11.06□□□□□ -0.64
HMGN1-220ENST00000492280 C1QTNF12Q5T7M4 302 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF626Q68DY1 528 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 STEAP1BQ6NZ63 245 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 SEZ6L2Q6UXD5 910 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 NAA40Q86UY6 237 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 UEVLDQ8IX04 471 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 GABRG1Q8N1C3 465 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 CLEC1AQ8NC01 280 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 OR5D18Q8NGL1 313 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 OR1J2Q8NGS2 313 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 MR1Q95460 341 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 SPACA9Q96E40 222 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-220ENST00000492280 RBP7Q96R05 134 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 NICN1Q9BSH3 213 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 FAM206AQ9NX38 181 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 ALKBH4Q9NXW9 302 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 GDF2Q9UK05 429 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-220ENST00000492280 PTRH2Q9Y3E5 179 aaKnown RBP11.06□□□□□ -0.64
HMGN1-220ENST00000492280 NCKAP5O14513 1909 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 FXYD6-FXYD2A0A087WZ82 144 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 NAP1L6A6NFF2 107 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 LEUTXA8MZ59 168 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 TNFRSF10AO00220 468 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 SYT7O43581 403 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 TRAF3IP2O43734 574 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-220ENST00000492280 AMY2AP04746 511 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 CCL3P10147 92 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 AP2S1P53680 142 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-220ENST00000492280 RAG2P55895 527 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 UNC119Q13432 240 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 LIN54Q6MZP7 749 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF767PQ75MW2 155 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 ABHD12BQ7Z5M8 362 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-220ENST00000492280 DTX1Q86Y01 620 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 MISPQ8IVT2 679 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 OR2M3Q8NG83 312 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 TNFAIP8L1Q8WVP5 186 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 RNF133Q8WVZ7 376 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 UCN2Q96RP3 112 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 PBOV1Q9GZY1 135 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 POFUT1Q9H488 388 aa11.06□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF230Q9UIE0 474 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-220ENST00000492280 CCSO14618 274 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 P2RY4P51582 365 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 ZNF468Q5VIY5 522 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-220ENST00000492280 PMS2CLQ68D20 193 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 C11orf88Q6PI97 169 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 IDO2Q6ZQW0 420 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.05□□□□□ -0.64
HMGN1-220ENST00000492280 ADGRE4PQ86SQ3 457 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 CYB5R1Q9UHQ9 305 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 NPTNQ9Y639 398 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 A6NIZ1 184 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 AKAIN1P0CW23 69 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 GNB3P16520 340 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 RAP1BP61224 184 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 RAP1AP62834 184 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 MRPS10P82664 201 aaKnown RBP11.05□□□□□ -0.64
HMGN1-220ENST00000492280 TOMM20Q15388 145 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 ANGPT1Q15389 498 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 TCEAL6Q6IPX3 200 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 C3orf33Q6P1S2 294 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 FAM219AQ8IW50 185 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 NOXO1Q8NFA2 376 aa11.05□□□□□ -0.64
HMGN1-220ENST00000492280 GPX8Q8TED1 209 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms