RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 FAM57BQ71RH2 274 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 FGD2Q7Z6J4 655 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 COMMD2Q86X83 199 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF100Q8IYN0 542 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 INTS12Q96CB8 462 aaKnown RBP12.23□□□□□ -0.45
SMPD4-219ENST00000491128 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 COQ7Q99807 217 aa12.23□□□□□ -0.45
SMPD4-219ENST00000491128 DDX28Q9NUL7 540 aaKnown RBP12.23□□□□□ -0.45
SMPD4-219ENST00000491128 PCDHGA9Q9Y5G4 932 aaKnown RBP12.23□□□□□ -0.45
SMPD4-219ENST00000491128 A0A0G2JK05 382 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF503-AS2A6NEH8 195 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 TMEM212A6NML5 194 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF878C9JN71 531 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 TAF4O00268 1085 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 GPRIN2O60269 458 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 SERPINA3P01011 423 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 CCL2P13500 99 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF32P17041 273 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 RAB3BP20337 219 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 CAPZA2P47755 286 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 DCTN2Q13561 401 aaKnown RBP12.22□□□□□ -0.45
SMPD4-219ENST00000491128 RSPO1Q2MKA7 263 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-219ENST00000491128 CCDC92Q53HC0 331 aaPredicted RBP12.22□□□□□ -0.45
SMPD4-219ENST00000491128 CEP78Q5JTW2 689 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 ASPHD2Q6ICH7 369 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 PARP16Q8N5Y8 322 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF283Q8N7M2 679 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 CNEP1R1Q8N9A8 125 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 OR51E1Q8TCB6 317 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 APH1AQ96BI3 265 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 MED18Q9BUE0 208 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 PBOV1Q9GZY1 135 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 UPB1Q9UBR1 384 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 LOC107986453A0A1B0GWG9 222 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 A0A1W2PR80 420 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 GPR171O14626 319 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 HLA-HP01893 362 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 ANXA2P07355 339 aaKnown RBP12.22□□□□□ -0.45
SMPD4-219ENST00000491128 SNRPBP14678 240 aaKnown RBP12.22□□□□□ -0.45
SMPD4-219ENST00000491128 ADRA2CP18825 462 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 CD53P19397 219 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 CX3CR1P49238 355 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 MTNR1BP49286 362 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 TRAM1Q15629 374 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 TSC22D1Q15714 1073 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 BCL2L15Q5TBC7 163 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 SFXN4Q6P4A7 337 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 LUZP2Q86TE4 346 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 CISD2Q8N5K1 135 aaKnown RBP12.22□□□□□ -0.45
SMPD4-219ENST00000491128 EMC3Q9P0I2 261 aa12.22□□□□□ -0.45
SMPD4-219ENST00000491128 ADGRG4Q8IZF6 3080 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 TTRP02766 147 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 ATF1P18846 271 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 AGTR1P30556 359 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 MRPS34P82930 218 aaKnown RBP12.21□□□□□ -0.45
SMPD4-219ENST00000491128 FOXF2Q12947 444 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 KCNMB1Q16558 191 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 ZNF829Q3KNS6 432 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-219ENST00000491128 PRR30Q53SZ7 412 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-219ENST00000491128 UNQ9370/PRO34162Q6UXP9 181 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 SLC16A14Q7RTX9 510 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 GPR148Q8TDV2 347 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 SIAEQ9HAT2 523 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 BCO1Q9HAY6 547 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 TMEM165Q9HC07 324 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 HMG20AQ9NP66 347 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 NBASA2RRP1 2371 aa12.21□□□□□ -0.45
SMPD4-219ENST00000491128 ACSM4P0C7M7 580 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 NR2C1P13056 603 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 ID4P47928 161 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF133P52736 654 aaPredicted RBP12.21□□□□□ -0.46
SMPD4-219ENST00000491128 LSM6P62312 80 aaKnown RBP12.21□□□□□ -0.46
SMPD4-219ENST00000491128 FAM27BQ5VT28 67 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 C9orf106Q8NAJ2 232 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 OR51A2Q8NGJ7 313 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 OR5H6Q8NGV6 325 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 CPT1CQ8TCG5 803 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 ASB5Q8WWX0 329 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 PLGRKTQ9HBL7 147 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 C14orf119Q9NWQ9 140 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 PAQR5Q9NXK6 330 aaPredicted RBP12.21□□□□□ -0.46
SMPD4-219ENST00000491128 CMAHPQ9Y471 501 aa12.21□□□□□ -0.46
SMPD4-219ENST00000491128 ITPR1Q14643 2758 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 CDK2AP1O14519 115 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 TBX1O43435 398 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 ZNF254O75437 659 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 ARL6IP5O75915 188 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 PSG4Q00888 419 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 HGFACQ04756 655 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 STAC2Q6ZMT1 411 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 GJC3Q8NFK1 279 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 OR8B12Q8NGG6 310 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 OR13C3Q8NGS6 347 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 SNRNP27Q8WVK2 155 aaKnown RBP12.2□□□□□ -0.46
SMPD4-219ENST00000491128 FAM71F1Q96KD3 344 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-219ENST00000491128 PRDM14Q9GZV8 571 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 KCNK15Q9H427 330 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 RNF122Q9H9V4 155 aa12.2□□□□□ -0.46
SMPD4-219ENST00000491128 TCF7L1Q9HCS4 588 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms