RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CTLA4P16410 223 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 SDHAP31040 664 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 SLC6A6P31641 620 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 IL2RGP31785 369 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 CRYBB2P43320 205 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 RPS6KA3P51812 740 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 KRR1Q13601 381 aaKnown RBP8.85□□□□□ -0.99
TTC28-207ENST00000490475 TRIP10Q15642 601 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 HFEQ30201 348 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 SLC35F1Q5T1Q4 408 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 OTPQ5XKR4 325 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 ACSM5Q6NUN0 579 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 ZNF620Q6ZNG0 422 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 PEG10Q86TG7 708 aaKnown RBP8.85□□□□□ -0.99
TTC28-207ENST00000490475 HS3ST5Q8IZT8 346 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 OR10G2Q8NGC3 310 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 OR8D4Q8NGM9 314 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 OR4K13Q8NH42 304 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 RAB1CQ92928 201 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 NABP1Q96AH0 204 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 ELMOD3Q96FG2 381 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 TSSK2Q96PF2 358 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 DIRC2Q96SL1 478 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 NIPSNAP1Q9BPW8 284 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 DGCR6LQ9BY27 220 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 MRPS26Q9BYN8 205 aaKnown RBP8.85□□□□□ -0.99
TTC28-207ENST00000490475 EGLN1Q9GZT9 426 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 NUAK2Q9H093 628 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 OCEL1Q9H607 264 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 NTN4Q9HB63 628 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 SRA1Q9HD15 236 aaKnown RBP8.85□□□□□ -0.99
TTC28-207ENST00000490475 PDP1Q9P0J1 537 aaPredicted RBP8.85□□□□□ -0.99
TTC28-207ENST00000490475 DNAJB9Q9UBS3 223 aa8.85□□□□□ -0.99
TTC28-207ENST00000490475 A0A0G2JMP0 313 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 A0A0X1KG70 313 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 A0A1W2PPL8 197 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 LYNX1G3V0Z9 82 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 J3QLI3 93 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 ARPC3O15145 178 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 E2F6O75461 281 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 RP2O75695 350 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 MPZL1O95297 269 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 SOX14O95416 240 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 GPANK1O95872 356 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 PNPP00491 289 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 FAM157BP0CG42 384 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 LYNX1P0DP58 116 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 NAT2P11245 290 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 CCL2P13500 99 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 HOXB6P17509 224 aaKnown RBP8.84□□□□□ -0.99
TTC28-207ENST00000490475 COL8A2P25067 703 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 STOMP27105 288 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 LAP3P28838 519 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 NOS3P29474 1203 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 GDI2P50395 445 aaKnown RBP8.84□□□□□ -0.99
TTC28-207ENST00000490475 ARHGDIAP52565 204 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 MAD2L1BPQ15013 274 aaPredicted RBP8.84□□□□□ -0.99
TTC28-207ENST00000490475 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 CNPY1Q3B7I2 92 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 FAM27BQ5VT28 67 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 FOXB2Q5VYV0 432 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 LEG1Q6P5S2 330 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 RASSF6Q6ZTQ3 369 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 USP43Q70EL4 1123 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 SYT9Q86SS6 491 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 LRP11Q86VZ4 500 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 PACRGLQ8N7B6 248 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 OR4M2Q8NGB6 313 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 PYDC1Q8WXC3 89 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 ITFG2Q969R8 447 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 PPP1R14BQ96C90 147 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 NMNAT3Q96T66 252 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 SYT4Q9H2B2 425 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 METTL17Q9H7H0 456 aaPredicted RBP8.84□□□□□ -0.99
TTC28-207ENST00000490475 SAP30LQ9HAJ7 183 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 ELOVL3Q9HB03 270 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 EMC7Q9NPA0 242 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 ETAA1Q9NY74 926 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 IL20Q9NYY1 176 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 VSX1Q9NZR4 365 aaPredicted RBP8.84□□□□□ -0.99
TTC28-207ENST00000490475 ZDHHC8Q9ULC8 765 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 FZR1Q9UM11 496 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 COA3Q9Y2R0 106 aaPredicted RBP8.84□□□□□ -0.99
TTC28-207ENST00000490475 AP4S1Q9Y587 144 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 CDH10Q9Y6N8 788 aa8.84□□□□□ -0.99
TTC28-207ENST00000490475 OR6C68A6NDL8 312 aa8.83□□□□□ -1
TTC28-207ENST00000490475 DCTN6O00399 190 aa8.83□□□□□ -1
TTC28-207ENST00000490475 BHLHE40O14503 412 aa8.83□□□□□ -1
TTC28-207ENST00000490475 IDH3BO43837 385 aa8.83□□□□□ -1
TTC28-207ENST00000490475 ICMTO60725 284 aa8.83□□□□□ -1
TTC28-207ENST00000490475 KHDRBS3O75525 346 aaKnown RBP8.83□□□□□ -1
TTC28-207ENST00000490475 ADH4P08319 380 aa8.83□□□□□ -1
TTC28-207ENST00000490475 MMP7P09237 267 aaPredicted RBP8.83□□□□□ -1
TTC28-207ENST00000490475 GSTM3P21266 225 aa8.83□□□□□ -1
TTC28-207ENST00000490475 CENPAP49450 140 aa8.83□□□□□ -1
TTC28-207ENST00000490475 ZNF81P51508 661 aa8.83□□□□□ -1
TTC28-207ENST00000490475 LMO4P61968 165 aa8.83□□□□□ -1
TTC28-207ENST00000490475 CCL8P80075 99 aa8.83□□□□□ -1
TTC28-207ENST00000490475 PABPC1L2AQ5JQF8 200 aa8.83□□□□□ -1
TTC28-207ENST00000490475 ZNF362Q5T0B9 420 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms