RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 CMBLQ96DG6 245 aa14.84□□□□□ -0.03
SEC13-218ENST00000490283 PITX2Q99697 317 aa14.84□□□□□ -0.03
SEC13-218ENST00000490283 BTBD10Q9BSF8 475 aa14.84□□□□□ -0.03
SEC13-218ENST00000490283 MSL2Q9HCI7 577 aa14.84□□□□□ -0.03
SEC13-218ENST00000490283 TREM2Q9NZC2 230 aa14.84□□□□□ -0.03
SEC13-218ENST00000490283 PURGQ9UJV8 347 aaKnown RBP14.84□□□□□ -0.03
SEC13-218ENST00000490283 STARD10Q9Y365 291 aa14.84□□□□□ -0.03
SEC13-218ENST00000490283 LHFPL6Q9Y693 200 aa14.84□□□□□ -0.03
SEC13-218ENST00000490283 SURF4O15260 269 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 GASTP01350 101 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 CD55P08174 381 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 T-ENOLP0DO92 83 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 RAP2AP10114 183 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 RAC2P15153 192 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 ZNF823P16415 610 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 TNFRSF1AP19438 455 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 KITLGP21583 273 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 ECH1Q13011 328 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 MICAQ29983 383 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 CORO6Q6QEF8 472 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 CXXC5Q7LFL8 322 aaKnown RBP14.83□□□□□ -0.04
SEC13-218ENST00000490283 PROKR2Q8NFJ6 384 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 OR4C15Q8NGM1 316 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 OR2T4Q8NH00 348 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 MDFIQ99750 246 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 THTPAQ9BU02 230 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 FN3KQ9H479 309 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 TAS2R1Q9NYW7 299 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 IL20Q9NYY1 176 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 KCNG2Q9UJ96 466 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 BAIAP2Q9UQB8 552 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 U3KQV3 271 aa14.83□□□□□ -0.04
SEC13-218ENST00000490283 YLPM1P49750 1951 aaKnown RBP14.82□□□□□ -0.04
SEC13-218ENST00000490283 ISPDA4D126 451 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 OR6C68A6NDL8 312 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 RNF212BA8MTL3 300 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 MSMBP08118 114 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 DBHP09172 617 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 HOXB6P17509 224 aaKnown RBP14.82□□□□□ -0.04
SEC13-218ENST00000490283 THBS2P35442 1172 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 HIST1H3AP68431 136 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 MS4A2Q01362 244 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 TRAP1Q12931 704 aaKnown RBP14.82□□□□□ -0.04
SEC13-218ENST00000490283 DNAL1Q4LDG9 190 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 HIST2H3PS2Q5TEC6 136 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 ZNF770Q6IQ21 691 aaPredicted RBP14.82□□□□□ -0.04
SEC13-218ENST00000490283 HIST2H3AQ71DI3 136 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 TRPM8Q7Z2W7 1104 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 LINC00346Q8IVM7 164 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 OR2Z1Q8NG97 314 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 BCAS4Q8TDM0 211 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 TMEM158Q8WZ71 300 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 TMEM186Q96B77 213 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 HAVCR1Q96D42 359 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 GAL3ST1Q99999 423 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 TSSK6Q9BXA6 273 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 POFUT1Q9H488 388 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 ZNF665Q9H7R5 613 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 LPAR2Q9HBW0 351 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 PTTG3PQ9NZH4 202 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 KLHL21Q9UJP4 597 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 WIPI2Q9Y4P8 454 aa14.82□□□□□ -0.04
SEC13-218ENST00000490283 ANK3Q12955 4377 aaKnown RBP14.81□□□□□ -0.04
SEC13-218ENST00000490283 BHLHE40O14503 412 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 GNGT2O14610 69 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 WNT9BO14905 357 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 GYG2O15488 501 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 CST1P01037 141 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 IFNGP01579 166 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 PPP1R8Q12972 351 aaKnown RBP14.81□□□□□ -0.04
SEC13-218ENST00000490283 CDK5R2Q13319 367 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 TMEM255AQ5JRV8 349 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 SLC18B1Q6NT16 456 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 ACSM5Q6NUN0 579 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 SLC27A4Q6P1M0 643 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 OR2T33Q8NG76 320 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 CLPTM1LQ96KA5 538 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 ATF6BQ99941 703 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 HCAR1Q9BXC0 346 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 DGCR6LQ9BY27 220 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 HIF1ANQ9NWT6 349 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 CACNG2Q9Y698 323 aa14.81□□□□□ -0.04
SEC13-218ENST00000490283 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.81□□□□□ -0.041e-8■■■□□ 15.6
SEC13-218ENST00000490283 MALRD1Q5VYJ5 2156 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 TRAV20A0A0B4J274 112 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 FAM157AC9JC47 383 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 F5H5K5 113 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 PHF1O43189 567 aaPredicted RBP14.8□□□□□ -0.04
SEC13-218ENST00000490283 UBOX5O94941 541 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 SELEP16581 610 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 LMO4P61968 165 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 MALLQ13021 153 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 SHQ1Q6PI26 577 aaKnown RBP14.8□□□□□ -0.04
SEC13-218ENST00000490283 FBXW12Q6X9E4 464 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 CFAP77Q6ZQR2 320 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 LNX2Q8N448 690 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 CYB561A3Q8NBI2 242 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 OR10G2Q8NGC3 310 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 TEX47Q8TBZ9 253 aa14.8□□□□□ -0.04
SEC13-218ENST00000490283 SPTSSAQ969W0 71 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms