RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 POLR1CO15160 346 aaPredicted RBP2.27□□□□□ -2.05
CCDC39-206ENST00000489868 CHST10O43529 356 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 SLC2A3P11169 496 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 ATF6P18850 670 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 NAA10P41227 235 aaPredicted RBP2.27□□□□□ -2.05
CCDC39-206ENST00000489868 SYNJ2BPP57105 145 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 QPRTQ15274 297 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 MAJINQ3KP22 176 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 TCEAL5Q5H9L2 206 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 SOHLH1Q5JUK2 328 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 ZNF101Q8IZC7 436 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 OR9K2Q8NGE7 335 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 TCEAL3Q969E4 200 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 ENOPH1Q9UHY7 261 aa2.27□□□□□ -2.05
CCDC39-206ENST00000489868 AKNAQ7Z591 1439 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 TRAV19A0A0A6YYK7 116 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 IGHV3-72A0A0B4J1Y9 119 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 IGHV7-4-1A0A0J9YVY3 117 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 BTNL10A8MVZ5 291 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 FKBP6O75344 327 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 H6PDO95479 791 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 ERGP11308 486 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 FOXN2P32314 431 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 ACLYP53396 1101 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 VSX2P58304 361 aaPredicted RBP2.26□□□□□ -2.05
CCDC39-206ENST00000489868 RPL23P62829 140 aaKnown RBP2.26□□□□□ -2.05
CCDC39-206ENST00000489868 SRSF5Q13243 272 aaKnown RBP2.26□□□□□ -2.05
CCDC39-206ENST00000489868 CHRNA6Q15825 494 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 MBOAT1Q6ZNC8 495 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 TMEM150AQ86TG1 271 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 NKAIN4Q8IVV8 208 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 OR13C2Q8NGS9 318 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 KCNG3Q8TAE7 436 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 EXOSC4Q9NPD3 245 aaKnown RBP2.26□□□□□ -2.05
CCDC39-206ENST00000489868 LGALS13Q9UHV8 139 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 ZNF391Q9UJN7 358 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 SIGLEC7Q9Y286 467 aa2.26□□□□□ -2.05
CCDC39-206ENST00000489868 SDK2Q58EX2 2172 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 TMEM120BA0PK00 339 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 ZNF98A6NK75 572 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 NCBP2LA6PVI3 153 aaKnown RBP2.25□□□□□ -2.05
CCDC39-206ENST00000489868 GABRR3A8MPY1 467 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 C16orf90A8MZG2 172 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 SMKR1H3BMG3 65 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 CBR3O75828 277 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 SLC22A5O76082 557 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 PABPC4LP0CB38 370 aaKnown RBP2.25□□□□□ -2.05
CCDC39-206ENST00000489868 CD37P11049 281 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 RBX1P62877 108 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 TGM3Q08188 693 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 TAF9Q16594 264 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 PPM1LQ5SGD2 360 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 UBE2UQ5VVX9 321 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 SPINT4Q6UDR6 99 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 LRP11Q86VZ4 500 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 CDR2LQ86X02 465 aaPredicted RBP2.25□□□□□ -2.05
CCDC39-206ENST00000489868 OR5M1Q8NGP8 315 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 FBXO32Q969P5 355 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 ANGPTL4Q9BY76 406 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 ILKAPQ9H0C8 392 aaPredicted RBP2.25□□□□□ -2.05
CCDC39-206ENST00000489868 ZNF586Q9NXT0 402 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 SLC2A8Q9NY64 477 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 EXTL2Q9UBQ6 330 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 SCN4AP35499 1836 aa2.25□□□□□ -2.05
CCDC39-206ENST00000489868 DHX57Q6P158 1386 aaKnown RBP2.24□□□□□ -2.05
CCDC39-206ENST00000489868 USP47Q96K76 1375 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 TRAV6A0A075B6T7 132 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 CPLX1O14810 134 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 GLSO94925 669 aaPredicted RBP2.24□□□□□ -2.05
CCDC39-206ENST00000489868 SEMA3DO95025 777 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 NDUFB10O96000 172 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 TNNI1P19237 187 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 U2AF2P26368 475 aaKnown RBP eCLIP2.24□□□□□ -2.05
CCDC39-206ENST00000489868 TGFBR1P36897 503 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 CDH6P55285 790 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 DDX39BQ13838 428 aaKnown RBP2.24□□□□□ -2.05
CCDC39-206ENST00000489868 ADNP2Q6IQ32 1131 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 SLC8B1Q6J4K2 584 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 CERS6Q6ZMG9 384 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 SLC35G3Q8N808 338 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 OR11H7Q8NGC8 314 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 TMEM230Q96A57 120 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 DCPSQ96C86 337 aaKnown RBP2.24□□□□□ -2.05
CCDC39-206ENST00000489868 DNAJC1Q96KC8 554 aaKnown RBP2.24□□□□□ -2.05
CCDC39-206ENST00000489868 RSG1Q9BU20 258 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 PLA2G12AQ9BZM1 189 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 HRASLS2Q9NWW9 162 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 C21orf62Q9NYP8 219 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 ADGRL1O94910 1474 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 LTBP4Q8N2S1 1624 aa2.24□□□□□ -2.05
CCDC39-206ENST00000489868 A0A0J9YXV3 536 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 A0A1W2PNN7 141 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 SMCO2A6NFE2 343 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 NDUFC2-KCTD14E9PQ53 114 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 PLPP1O14494 284 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 IGHV3-11P01762 117 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 SERPINE2P07093 398 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 PRLHRP49683 370 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 RPS23P62266 143 aaKnown RBP2.23□□□□□ -2.05
CCDC39-206ENST00000489868 FUT5Q11128 374 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms