RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PRR23D1E9PI22 279 aaPredicted RBP14.84□□□□□ -0.03
MDC1-206ENST00000489540 SURF4O15260 269 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 PRR23D2P0DMB1 279 aaPredicted RBP14.84□□□□□ -0.03
MDC1-206ENST00000489540 CLUP10909 449 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 NAT2P11245 290 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 LIPAP38571 399 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 MPV17P39210 176 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 ENTPD1P49961 510 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 PCK2Q16822 640 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 TMEM154Q6P9G4 183 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 CFAP77Q6ZQR2 320 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 ZNF511Q8NB15 262 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 OR5L1Q8NGL2 311 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 OR6K6Q8NGW6 343 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 UBASH3BQ8TF42 649 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 PYDC1Q8WXC3 89 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 PLEKHA8Q96JA3 519 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 ATF6BQ99941 703 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 GABARAPL1Q9H0R8 117 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 TPK1Q9H3S4 243 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 GSX1Q9H4S2 264 aaPredicted RBP14.84□□□□□ -0.03
MDC1-206ENST00000489540 CYSLTR2Q9NS75 346 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 KRT84Q9NSB2 600 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.84□□□□□ -0.03
MDC1-206ENST00000489540 ENOPH1Q9UHY7 261 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 STARD10Q9Y365 291 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 COMMD3-BMI1R4GMX3 469 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 VPS13CQ709C8 3753 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 ARFGEF3Q5TH69 2177 aa14.84□□□□□ -0.03
MDC1-206ENST00000489540 FAM183AA6NL82 134 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 C17orf100A8MU93 164 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 ZNF593O00488 134 aaPredicted RBP14.83□□□□□ -0.03
MDC1-206ENST00000489540 DBHP09172 617 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 CARTPTQ16568 116 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 RSPO1Q2MKA7 263 aaPredicted RBP14.83□□□□□ -0.03
MDC1-206ENST00000489540 PCGF3Q3KNV8 242 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 ALKBH6Q3KRA9 238 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 KRTAP27-1Q3LI81 207 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 LINC01590Q5TEZ4 76 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 TMEM236Q5W0B7 351 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 KDM4DQ6B0I6 523 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 CLEC9AQ6UXN8 241 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 ZNF786Q8N393 782 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 APOBEC3DQ96AK3 386 aaPredicted RBP14.83□□□□□ -0.03
MDC1-206ENST00000489540 SMR3AQ99954 134 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 PIMREGQ9BSJ6 248 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 OSBPL10Q9BXB5 764 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 OR51V1Q9H2C8 321 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 SEMA6AQ9H2E6 1030 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 MED20Q9H944 212 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 WDR76Q9H967 626 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 PNRC2Q9NPJ4 139 aaKnown RBP14.83□□□□□ -0.03
MDC1-206ENST00000489540 NKIRAS2Q9NYR9 191 aa14.83□□□□□ -0.03
MDC1-206ENST00000489540 CGGBP1Q9UFW8 167 aaPredicted RBP14.83□□□□□ -0.03
MDC1-206ENST00000489540 FLNAP21333 2647 aaKnown RBP14.83□□□□□ -0.04
MDC1-206ENST00000489540 PLSCR5A0PG75 271 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 GLCEO94923 617 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 GSTT1P30711 240 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 PTGES3Q15185 160 aaKnown RBP14.83□□□□□ -0.04
MDC1-206ENST00000489540 SNAPC1Q16533 368 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 PLBD1Q6P4A8 553 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 LYPD4Q6UWN0 246 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 SPTSSAQ969W0 71 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 MAP6Q96JE9 813 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 HCAR1Q9BXC0 346 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 PRRG3Q9BZD7 231 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 TVP23BQ9NYZ1 205 aa14.83□□□□□ -0.04
MDC1-206ENST00000489540 VWC2LB2RUY7 222 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 F5H5K5 113 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 PRODHO43272 600 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 LY6G6DO95868 133 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 SPARCP09486 303 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 ZNF81P51508 661 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 TPTEP56180 551 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 MRPS11P82912 194 aaKnown RBP14.82□□□□□ -0.04
MDC1-206ENST00000489540 LOXL1Q08397 574 aaPredicted RBP14.82□□□□□ -0.04
MDC1-206ENST00000489540 PSG7Q13046 419 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 ZMAT1Q5H9K5 638 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 SLC35D3Q5M8T2 416 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 COLCA1Q6ZS62 124 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 DCXRQ7Z4W1 244 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 CPOQ8IVL8 374 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 RDH5Q92781 318 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 HAVCR1Q96D42 359 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 CMBLQ96DG6 245 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 INTS14Q96SY0 518 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 C1QTNF5Q9BXJ0 243 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 MARCH7Q9H992 704 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 DDX28Q9NUL7 540 aaKnown RBP14.82□□□□□ -0.04
MDC1-206ENST00000489540 OAZ3Q9UMX2 235 aa14.82□□□□□ -0.04
MDC1-206ENST00000489540 TIMM8AO60220 97 aaPredicted RBP14.81□□□□□ -0.04
MDC1-206ENST00000489540 MITFO75030 526 aaPredicted RBP14.81□□□□□ -0.04
MDC1-206ENST00000489540 ACSM4P0C7M7 580 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 RAC2P15153 192 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 KITLGP21583 273 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 USF1P22415 310 aaPredicted RBP14.81□□□□□ -0.04
MDC1-206ENST00000489540 GIFP27352 417 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 RPS27P42677 84 aaKnown RBP14.81□□□□□ -0.04
MDC1-206ENST00000489540 NR4A2P43354 598 aa14.81□□□□□ -0.04
MDC1-206ENST00000489540 MMP15P51511 669 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms